RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 HMG20BQ9P0W2 317 aa22.12■■□□□ 1.13
PRKCSH-211ENST00000590098 PTCH2Q9Y6C5 1203 aa22.12■■□□□ 1.13
PRKCSH-211ENST00000590098 RBBP6Q7Z6E9 1792 aaKnown RBP22.12■■□□□ 1.13
PRKCSH-211ENST00000590098 CXCL11O14625 94 aa22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 GNRH1P01148 92 aa22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 LDHCP07864 332 aa22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 TMEM106CQ9BVX2 250 aa22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 RFX7Q2KHR2 1363 aa22.11■■□□□ 1.13
PRKCSH-211ENST00000590098 GPR75-ASB3A0A0A6YYF3 556 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 PHF20L1A8MW92 1017 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 SLURP2P0DP57 97 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 EN2P19622 333 aaPredicted RBP22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 C17orf99Q6UX52 265 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 SH3BP5LQ7L8J4 393 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 SCYL3Q8IZE3 742 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 CPA4Q9UI42 421 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 ZHX2Q9Y6X8 837 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 ATRNL1Q5VV63 1379 aa22.1■■□□□ 1.13
PRKCSH-211ENST00000590098 ECM2O94769 699 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 UQCRFS1P1P0C7P4 283 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 ARID4AP29374 1257 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 MOGSQ13724 837 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 PI16Q6UXB8 463 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 TBC1D9Q6ZT07 1266 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 ZNF333Q96JL9 665 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 DDX4Q9NQI0 724 aaKnown RBP22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 RAI14Q9P0K7 980 aa22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 MKI67P46013 3256 aaKnown RBP22.09■■□□□ 1.13
PRKCSH-211ENST00000590098 ZSWIM8A7E2V4 1837 aa22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 DDTLA6NHG4 134 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 MAP4K4O95819 1239 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 CTGFP29279 349 aa22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 PRMT2P55345 433 aa22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 MAP3K10Q02779 954 aa22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 OS9Q13438 667 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 FASTKD5Q7L8L6 764 aaKnown RBP22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 FTSJ3Q8IY81 847 aaKnown RBP22.08■■□□□ 1.13
PRKCSH-211ENST00000590098 PTPRAP18433 802 aa22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 RHBDL3P58872 404 aa22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 ZNF384Q8TF68 577 aa22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 NSUN4Q96CB9 384 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 PARK7Q99497 189 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 LRP2BPQ9P2M1 347 aa22.07■■□□□ 1.12
PRKCSH-211ENST00000590098 BRCA2P51587 3418 aa22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 CTNND1O60716 968 aaKnown RBP22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 NPM3O75607 178 aaKnown RBP22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 MCAMP43121 646 aa22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 SLC4A8Q2Y0W8 1093 aa22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 NOL10Q9BSC4 688 aaKnown RBP22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 DOCK1Q14185 1865 aa22.06■■□□□ 1.12
PRKCSH-211ENST00000590098 FMNL1O95466 1100 aaPredicted RBP22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 MYCP01106 439 aaPredicted RBP22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 HOXD10P28358 340 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 PSMC4P43686 418 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 ATP8B2P98198 1209 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 POLA2Q14181 598 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 TTC39AQ5SRH9 613 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 MIER1Q8N108 512 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 SSH3Q8TE77 659 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 AFG3L2Q9Y4W6 797 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 ADGRA2Q96PE1 1338 aa22.05■■□□□ 1.12
PRKCSH-211ENST00000590098 A0A0G2JLL6 359 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 GPAT2Q6NUI2 795 aa22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 GADL1Q6ZQY3 521 aa22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 PRRT2Q7Z6L0 340 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 ITPRIPQ8IWB1 547 aa22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 SH3TC2Q8TF17 1288 aa22.04■■□□□ 1.12
PRKCSH-211ENST00000590098 TBC1D12O60347 775 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 CYP2C8P10632 490 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 TNNI3KQ59H18 835 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 TRIM47Q96LD4 638 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 C1orf115Q9H7X2 142 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 FPGT-TNNI3KV9GXZ4 949 aa22.03■■□□□ 1.12
PRKCSH-211ENST00000590098 PTPRFP10586 1907 aa22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 TEX11Q8IYF3 940 aa22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 OSBPL5Q9H0X9 879 aaPredicted RBP22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 SNRKQ9NRH2 765 aa22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 SRRDQ9UH36 339 aa22.02■■□□□ 1.12
PRKCSH-211ENST00000590098 PHIPQ8WWQ0 1821 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 TRIM75PA6NK02 468 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 BAG3O95817 575 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 OSBPP22059 807 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 NAA16Q6N069 864 aaPredicted RBP22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 RAET1EQ8TD07 263 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 DBNDD2Q9BQY9 259 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 SLC45A1Q9Y2W3 748 aa22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 COL2A1P02458 1487 aaPredicted RBP22.01■■□□□ 1.11
PRKCSH-211ENST00000590098 FAM196BA6NMK8 535 aa22■■□□□ 1.11
PRKCSH-211ENST00000590098 ZBTB7BO15156 539 aaPredicted RBP22■■□□□ 1.11
PRKCSH-211ENST00000590098 BCRP11274 1271 aa22■■□□□ 1.11
PRKCSH-211ENST00000590098 FCGRTP55899 365 aa22■■□□□ 1.11
PRKCSH-211ENST00000590098 FRMD4AQ9P2Q2 1039 aaPredicted RBP22■■□□□ 1.11
PRKCSH-211ENST00000590098 MGAMO43451 1857 aa22■■□□□ 1.11
PRKCSH-211ENST00000590098 PLCG2P16885 1265 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms