RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 BTDP43251 543 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 NOL9Q5SY16 702 aaKnown RBP23.17■■□□□ 1.3
TRIM47-205ENST00000587774 GORABQ5T7V8 394 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 ERICH6Q7L0X2 663 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-205ENST00000587774 SPATA5Q8NB90 893 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 FAM163AQ96GL9 167 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-205ENST00000587774 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 ZCCHC17Q9NP64 241 aaKnown RBP23.17■■□□□ 1.3
TRIM47-205ENST00000587774 POLA2Q14181 598 aa23.16■■□□□ 1.3
TRIM47-205ENST00000587774 SH3BP5LQ7L8J4 393 aa23.16■■□□□ 1.3
TRIM47-205ENST00000587774 FTSJ3Q8IY81 847 aaKnown RBP23.16■■□□□ 1.3
TRIM47-205ENST00000587774 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
TRIM47-205ENST00000587774 RLBP1P12271 317 aa23.15■■□□□ 1.3
TRIM47-205ENST00000587774 MCAMP43121 646 aa23.15■■□□□ 1.3
TRIM47-205ENST00000587774 PICALMQ13492 652 aa23.15■■□□□ 1.3
TRIM47-205ENST00000587774 KCNH4Q9UQ05 1017 aa23.15■■□□□ 1.3
TRIM47-205ENST00000587774 ZBED9Q6R2W3 1325 aa23.14■■□□□ 1.3
TRIM47-205ENST00000587774 TLR2O60603 784 aa23.14■■□□□ 1.29
TRIM47-205ENST00000587774 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
TRIM47-205ENST00000587774 ITPRIPQ8IWB1 547 aa23.14■■□□□ 1.29
TRIM47-205ENST00000587774 ZSCAN29Q8IWY8 852 aaPredicted RBP23.14■■□□□ 1.29
TRIM47-205ENST00000587774 SSH3Q8TE77 659 aa23.14■■□□□ 1.29
TRIM47-205ENST00000587774 MYH7P12883 1935 aa23.14■■□□□ 1.29
TRIM47-205ENST00000587774 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
TRIM47-205ENST00000587774 GPR75-ASB3A0A0A6YYF3 556 aa23.13■■□□□ 1.29
TRIM47-205ENST00000587774 DDTLA6NHG4 134 aaPredicted RBP23.13■■□□□ 1.29
TRIM47-205ENST00000587774 PHF20L1A8MW92 1017 aa23.13■■□□□ 1.29
TRIM47-205ENST00000587774 RHBDL3P58872 404 aa23.13■■□□□ 1.29
TRIM47-205ENST00000587774 NSUN4Q96CB9 384 aaKnown RBP23.13■■□□□ 1.29
TRIM47-205ENST00000587774 MYH8P13535 1937 aa23.13■■□□□ 1.29
TRIM47-205ENST00000587774 SLURP2P0DP57 97 aa23.12■■□□□ 1.29
TRIM47-205ENST00000587774 NAV1Q8NEY1 1877 aa23.12■■□□□ 1.29
TRIM47-205ENST00000587774 UQCRFS1P1P0C7P4 283 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 OS9Q13438 667 aaPredicted RBP23.11■■□□□ 1.29
TRIM47-205ENST00000587774 MOGSQ13724 837 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 TNNI3KQ59H18 835 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 ANKRD23Q86SG2 305 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 SCYL3Q8IZE3 742 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 ARHGAP39Q9C0H5 1083 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 RAI14Q9P0K7 980 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 FPGT-TNNI3KV9GXZ4 949 aa23.11■■□□□ 1.29
TRIM47-205ENST00000587774 GSTO1P78417 241 aa23.1■■□□□ 1.29
TRIM47-205ENST00000587774 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
TRIM47-205ENST00000587774 ARMC5Q96C12 935 aa23.1■■□□□ 1.29
TRIM47-205ENST00000587774 DBNDD2Q9BQY9 259 aa23.1■■□□□ 1.29
TRIM47-205ENST00000587774 PTCH2Q9Y6C5 1203 aa23.1■■□□□ 1.29
TRIM47-205ENST00000587774 ADGRA2Q96PE1 1338 aa23.09■■□□□ 1.29
TRIM47-205ENST00000587774 DDX60LQ5H9U9 1706 aaKnown RBP23.09■■□□□ 1.29
TRIM47-205ENST00000587774 POTEFA5A3E0 1075 aa23.09■■□□□ 1.29
TRIM47-205ENST00000587774 PDHXO00330 501 aa23.09■■□□□ 1.29
TRIM47-205ENST00000587774 ZBTB7BO15156 539 aaPredicted RBP23.09■■□□□ 1.29
TRIM47-205ENST00000587774 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
TRIM47-205ENST00000587774 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
TRIM47-205ENST00000587774 ARHGEF6Q15052 776 aa23.09■■□□□ 1.29
TRIM47-205ENST00000587774 LDHCP07864 332 aa23.08■■□□□ 1.29
TRIM47-205ENST00000587774 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.29
TRIM47-205ENST00000587774 PICK1Q9NRD5 415 aa23.08■■□□□ 1.29
TRIM47-205ENST00000587774 SNRKQ9NRH2 765 aa23.08■■□□□ 1.29
TRIM47-205ENST00000587774 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
TRIM47-205ENST00000587774 NPM3O75607 178 aaKnown RBP23.07■■□□□ 1.28
TRIM47-205ENST00000587774 PTPRAP18433 802 aa23.07■■□□□ 1.28
TRIM47-205ENST00000587774 C17orf99Q6UX52 265 aa23.07■■□□□ 1.28
TRIM47-205ENST00000587774 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
TRIM47-205ENST00000587774 CPA4Q9UI42 421 aa23.07■■□□□ 1.28
TRIM47-205ENST00000587774 ZHX2Q9Y6X8 837 aa23.07■■□□□ 1.28
TRIM47-205ENST00000587774 FAM196BA6NMK8 535 aa23.06■■□□□ 1.28
TRIM47-205ENST00000587774 CXCL11O14625 94 aa23.06■■□□□ 1.28
TRIM47-205ENST00000587774 KIF22Q14807 665 aa23.06■■□□□ 1.28
TRIM47-205ENST00000587774 SLC9C1Q4G0N8 1177 aa23.06■■□□□ 1.28
TRIM47-205ENST00000587774 CCDC158Q5M9N0 1113 aa23.06■■□□□ 1.28
TRIM47-205ENST00000587774 OSBPL5Q9H0X9 879 aaPredicted RBP23.06■■□□□ 1.28
TRIM47-205ENST00000587774 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
TRIM47-205ENST00000587774 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 ECM2O94769 699 aaPredicted RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 MAP4K4O95819 1239 aaPredicted RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 GPAT2Q6NUI2 795 aa23.05■■□□□ 1.28
TRIM47-205ENST00000587774 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 ZNF333Q96JL9 665 aa23.05■■□□□ 1.28
TRIM47-205ENST00000587774 TLR7Q9NYK1 1049 aaKnown RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 DBNLQ9UJU6 430 aaKnown RBP23.05■■□□□ 1.28
TRIM47-205ENST00000587774 AFG3L2Q9Y4W6 797 aa23.05■■□□□ 1.28
TRIM47-205ENST00000587774 CTNND1O60716 968 aaKnown RBP23.04■■□□□ 1.28
TRIM47-205ENST00000587774 CYP2E1P05181 493 aaPredicted RBP23.04■■□□□ 1.28
TRIM47-205ENST00000587774 CTGFP29279 349 aa23.04■■□□□ 1.28
TRIM47-205ENST00000587774 CEP85Q6P2H3 762 aa23.04■■□□□ 1.28
TRIM47-205ENST00000587774 TEX11Q8IYF3 940 aa23.04■■□□□ 1.28
TRIM47-205ENST00000587774 PANK1Q8TE04 598 aa23.04■■□□□ 1.28
TRIM47-205ENST00000587774 SH3RF3Q8TEJ3 882 aaPredicted RBP23.04■■□□□ 1.28
TRIM47-205ENST00000587774 PARK7Q99497 189 aaKnown RBP23.04■■□□□ 1.28
TRIM47-205ENST00000587774 TBC1D12O60347 775 aa23.03■■□□□ 1.28
TRIM47-205ENST00000587774 PRPF38BQ5VTL8 546 aaKnown RBP23.03■■□□□ 1.28
TRIM47-205ENST00000587774 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
TRIM47-205ENST00000587774 CCDC84Q86UT8 332 aaPredicted RBP23.03■■□□□ 1.28
TRIM47-205ENST00000587774 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRIM47-205ENST00000587774 GNRH1P01148 92 aa23.02■■□□□ 1.28
TRIM47-205ENST00000587774 CYP2C8P10632 490 aa23.02■■□□□ 1.28
TRIM47-205ENST00000587774 GADL1Q6ZQY3 521 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms