RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 DBNLQ9UJU6 430 aaKnown RBP21.9■■□□□ 1.1
ERBB2-221ENST00000584888 PTPN22Q9Y2R2 807 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 PPATQ06203 517 aa21.89■■□□□ 1.09
ERBB2-221ENST00000584888 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.09
ERBB2-221ENST00000584888 DZIP1Q86YF9 867 aaKnown RBP21.89■■□□□ 1.09
ERBB2-221ENST00000584888 ERC1Q8IUD2 1116 aa21.89■■□□□ 1.09
ERBB2-221ENST00000584888 BTBD19C9JJ37 291 aa21.88■■□□□ 1.09
ERBB2-221ENST00000584888 HMMRO75330 724 aa21.88■■□□□ 1.09
ERBB2-221ENST00000584888 CCDC158Q5M9N0 1113 aa21.88■■□□□ 1.09
ERBB2-221ENST00000584888 SLF2Q8IX21 1173 aa21.88■■□□□ 1.09
ERBB2-221ENST00000584888 IDI2Q9BXS1 227 aa21.88■■□□□ 1.09
ERBB2-221ENST00000584888 CCDC8Q9H0W5 538 aaPredicted RBP21.88■■□□□ 1.09
ERBB2-221ENST00000584888 ZCCHC17Q9NP64 241 aaKnown RBP21.88■■□□□ 1.09
ERBB2-221ENST00000584888 TLR7Q9NYK1 1049 aaKnown RBP21.88■■□□□ 1.09
ERBB2-221ENST00000584888 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
ERBB2-221ENST00000584888 RGS3P49796 1198 aa21.87■■□□□ 1.09
ERBB2-221ENST00000584888 MECOMQ03112 1051 aa21.87■■□□□ 1.09
ERBB2-221ENST00000584888 TBC1D9Q6ZT07 1266 aa21.87■■□□□ 1.09
ERBB2-221ENST00000584888 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
ERBB2-221ENST00000584888 RHPN1Q8TCX5 695 aa21.87■■□□□ 1.09
ERBB2-221ENST00000584888 YTHDC1Q96MU7 727 aaKnown RBP21.87■■□□□ 1.09
ERBB2-221ENST00000584888 ENTPD3O75355 529 aa21.86■■□□□ 1.09
ERBB2-221ENST00000584888 WDHD1O75717 1129 aaPredicted RBP21.86■■□□□ 1.09
ERBB2-221ENST00000584888 TTC39AQ5SRH9 613 aa21.86■■□□□ 1.09
ERBB2-221ENST00000584888 NSUN4Q96CB9 384 aaKnown RBP21.86■■□□□ 1.09
ERBB2-221ENST00000584888 PDE4DIPQ5VU43 2346 aa21.85■■□□□ 1.09
ERBB2-221ENST00000584888 AK9Q5TCS8 1911 aa21.85■■□□□ 1.09
ERBB2-221ENST00000584888 TLR2O60603 784 aa21.85■■□□□ 1.09
ERBB2-221ENST00000584888 NOL9Q5SY16 702 aaKnown RBP21.85■■□□□ 1.09
ERBB2-221ENST00000584888 MROH7-TTC4A0A0A0MT08 1334 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 GPR75-ASB3A0A0A6YYF3 556 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 RAB11FIP3O75154 756 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 CYP2E1P05181 493 aaPredicted RBP21.84■■□□□ 1.09
ERBB2-221ENST00000584888 BTDP43251 543 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 RRP1P56182 461 aaKnown RBP21.84■■□□□ 1.09
ERBB2-221ENST00000584888 ARHGEF6Q15052 776 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 SH3BP5LQ7L8J4 393 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 ZSCAN29Q8IWY8 852 aaPredicted RBP21.84■■□□□ 1.09
ERBB2-221ENST00000584888 KIF1BPQ96EK5 621 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 SNRKQ9NRH2 765 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 KCNH4Q9UQ05 1017 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 RFX7Q2KHR2 1363 aa21.84■■□□□ 1.09
ERBB2-221ENST00000584888 PHF20L1A8MW92 1017 aa21.83■■□□□ 1.09
ERBB2-221ENST00000584888 IL1RAPL2Q9NP60 686 aa21.83■■□□□ 1.09
ERBB2-221ENST00000584888 ATRNL1Q5VV63 1379 aa21.83■■□□□ 1.08
ERBB2-221ENST00000584888 IGSF3O75054 1194 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 ZAP70P43403 619 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 RHBDL3P58872 404 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 ANKRD23Q86SG2 305 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 AACSQ86V21 672 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 ARMC5Q96C12 935 aa21.82■■□□□ 1.08
ERBB2-221ENST00000584888 DDX4Q9NQI0 724 aaKnown RBP21.82■■□□□ 1.08
ERBB2-221ENST00000584888 DDTLA6NHG4 134 aaPredicted RBP21.81■■□□□ 1.08
ERBB2-221ENST00000584888 LDHCP07864 332 aa21.81■■□□□ 1.08
ERBB2-221ENST00000584888 MAP3K10Q02779 954 aa21.81■■□□□ 1.08
ERBB2-221ENST00000584888 PICALMQ13492 652 aa21.81■■□□□ 1.08
ERBB2-221ENST00000584888 TNRC18O15417 2968 aaPredicted RBP21.81■■□□□ 1.08
ERBB2-221ENST00000584888 POTEFA5A3E0 1075 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 PDHXO00330 501 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 GSTO1P78417 241 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 LACTBP83111 547 aaPredicted RBP21.8■■□□□ 1.08
ERBB2-221ENST00000584888 MOGSQ13724 837 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 SCYL3Q8IZE3 742 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 PIH1D3Q9NQM4 214 aaKnown RBP21.8■■□□□ 1.08
ERBB2-221ENST00000584888 RAI14Q9P0K7 980 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 LRP2BPQ9P2M1 347 aa21.8■■□□□ 1.08
ERBB2-221ENST00000584888 CXCL11O14625 94 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
ERBB2-221ENST00000584888 MAP4K4O95819 1239 aaPredicted RBP21.79■■□□□ 1.08
ERBB2-221ENST00000584888 SLURP2P0DP57 97 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 KIF22Q14807 665 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 C17orf99Q6UX52 265 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 CLASRPQ8N2M8 674 aaKnown RBP21.79■■□□□ 1.08
ERBB2-221ENST00000584888 ARHGAP39Q9C0H5 1083 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 PICK1Q9NRD5 415 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 PTCH2Q9Y6C5 1203 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 MAST2Q6P0Q8 1798 aa21.79■■□□□ 1.08
ERBB2-221ENST00000584888 CPA4Q9UI42 421 aa21.78■■□□□ 1.08
ERBB2-221ENST00000584888 ZHX2Q9Y6X8 837 aa21.78■■□□□ 1.08
ERBB2-221ENST00000584888 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
ERBB2-221ENST00000584888 HTTP42858 3142 aa21.77■■□□□ 1.08
ERBB2-221ENST00000584888 APBB1O00213 710 aa21.77■■□□□ 1.08
ERBB2-221ENST00000584888 PTPRAP18433 802 aa21.77■■□□□ 1.08
ERBB2-221ENST00000584888 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
ERBB2-221ENST00000584888 PCDHB15Q9Y5E8 787 aa21.77■■□□□ 1.08
ERBB2-221ENST00000584888 CTNND1O60716 968 aaKnown RBP21.76■■□□□ 1.07
ERBB2-221ENST00000584888 PPP4CP60510 307 aa21.76■■□□□ 1.07
ERBB2-221ENST00000584888 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
ERBB2-221ENST00000584888 GPAT2Q6NUI2 795 aa21.76■■□□□ 1.07
ERBB2-221ENST00000584888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.76■■□□□ 1.07
ERBB2-221ENST00000584888 KIAA0100Q14667 2235 aaKnown RBP21.76■■□□□ 1.07
ERBB2-221ENST00000584888 CDK5RAP2Q96SN8 1893 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 TBC1D12O60347 775 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 GNRH1P01148 92 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
ERBB2-221ENST00000584888 NAA16Q6N069 864 aaPredicted RBP21.75■■□□□ 1.07
ERBB2-221ENST00000584888 NBPF11Q86T75 865 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 ZNF333Q96JL9 665 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 AFG3L2Q9Y4W6 797 aa21.75■■□□□ 1.07
ERBB2-221ENST00000584888 NDUFB9Q9Y6M9 179 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms