RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 KCNH4Q9UQ05 1017 aa25.16■■□□□ 1.62
TOP3A-219ENST00000584887 DDTLA6NHG4 134 aaPredicted RBP25.15■■□□□ 1.62
TOP3A-219ENST00000584887 PDHXO00330 501 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 UQCRFS1P1P0C7P4 283 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 ARID4AP29374 1257 aaPredicted RBP25.15■■□□□ 1.62
TOP3A-219ENST00000584887 GSTO1P78417 241 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 ARHGAP39Q9C0H5 1083 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 PTCH2Q9Y6C5 1203 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 ATRNL1Q5VV63 1379 aa25.15■■□□□ 1.62
TOP3A-219ENST00000584887 POTEFA5A3E0 1075 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 LDHCP07864 332 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 SLURP2P0DP57 97 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 MCAMP43121 646 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 ANKRD23Q86SG2 305 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 SCYL3Q8IZE3 742 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 ZNF384Q8TF68 577 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 LRP2BPQ9P2M1 347 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 CPA4Q9UI42 421 aa25.14■■□□□ 1.62
TOP3A-219ENST00000584887 TNRC18O15417 2968 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-219ENST00000584887 GPR75-ASB3A0A0A6YYF3 556 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 SURF6O75683 361 aaKnown RBP25.13■■□□□ 1.61
TOP3A-219ENST00000584887 LACTBP83111 547 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-219ENST00000584887 POLA2Q14181 598 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 SLC9C1Q4G0N8 1177 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 TTC39AQ5SRH9 613 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 ARMC5Q96C12 935 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 SNRKQ9NRH2 765 aa25.13■■□□□ 1.61
TOP3A-219ENST00000584887 PHF20L1A8MW92 1017 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 RLBP1P12271 317 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 RHBDL3P58872 404 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 ATP8B2P98198 1209 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 TNNI3KQ59H18 835 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 NSUN4Q96CB9 384 aaKnown RBP25.12■■□□□ 1.61
TOP3A-219ENST00000584887 ZHX2Q9Y6X8 837 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 FPGT-TNNI3KV9GXZ4 949 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 ZSWIM8A7E2V4 1837 aa25.12■■□□□ 1.61
TOP3A-219ENST00000584887 MYCP01106 439 aaPredicted RBP25.11■■□□□ 1.61
TOP3A-219ENST00000584887 SSH3Q8TE77 659 aa25.11■■□□□ 1.61
TOP3A-219ENST00000584887 DBNDD2Q9BQY9 259 aa25.11■■□□□ 1.61
TOP3A-219ENST00000584887 CXCL11O14625 94 aa25.1■■□□□ 1.61
TOP3A-219ENST00000584887 PTPRAP18433 802 aa25.1■■□□□ 1.61
TOP3A-219ENST00000584887 CCDC158Q5M9N0 1113 aa25.1■■□□□ 1.61
TOP3A-219ENST00000584887 NOL10Q9BSC4 688 aaKnown RBP25.1■■□□□ 1.61
TOP3A-219ENST00000584887 FAM196BA6NMK8 535 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 MOGSQ13724 837 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 PRPF38BQ5VTL8 546 aaKnown RBP25.09■■□□□ 1.61
TOP3A-219ENST00000584887 GADL1Q6ZQY3 521 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 TEX11Q8IYF3 940 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 PARK7Q99497 189 aaKnown RBP25.09■■□□□ 1.61
TOP3A-219ENST00000584887 TMEM106CQ9BVX2 250 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 GPR108Q9NPR9 543 aa25.09■■□□□ 1.61
TOP3A-219ENST00000584887 C17orf99Q6UX52 265 aa25.08■■□□□ 1.61
TOP3A-219ENST00000584887 NBPF11Q86T75 865 aa25.08■■□□□ 1.61
TOP3A-219ENST00000584887 ZNF333Q96JL9 665 aa25.08■■□□□ 1.61
TOP3A-219ENST00000584887 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.08■■□□□ 1.61
TOP3A-219ENST00000584887 CTNND1O60716 968 aaKnown RBP25.07■■□□□ 1.6
TOP3A-219ENST00000584887 NAA16Q6N069 864 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-219ENST00000584887 CCDC84Q86UT8 332 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-219ENST00000584887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.07■■□□□ 1.6
TOP3A-219ENST00000584887 HTTP42858 3142 aa25.07■■□□□ 1.6
TOP3A-219ENST00000584887 ZBED9Q6R2W3 1325 aa25.07■■□□□ 1.6
TOP3A-219ENST00000584887 TRIM75PA6NK02 468 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 FMNL1O95466 1100 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-219ENST00000584887 CYP2C8P10632 490 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 EN2P19622 333 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-219ENST00000584887 PSMC4P43686 418 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 MAP3K10Q02779 954 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 SLC4A8Q2Y0W8 1093 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 GPAT2Q6NUI2 795 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 FASTKD5Q7L8L6 764 aaKnown RBP25.06■■□□□ 1.6
TOP3A-219ENST00000584887 SH3TC2Q8TF17 1288 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 OSBPL5Q9H0X9 879 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-219ENST00000584887 DOCK1Q14185 1865 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 ADGRA2Q96PE1 1338 aa25.06■■□□□ 1.6
TOP3A-219ENST00000584887 A0A0G2JLL6 359 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 ZBTB7BO15156 539 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 NPM3O75607 178 aaKnown RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 MAP4K4O95819 1239 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 PRRT2Q7Z6L0 340 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 PANK1Q8TE04 598 aa25.05■■□□□ 1.6
TOP3A-219ENST00000584887 SH3RF3Q8TEJ3 882 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-219ENST00000584887 AFG3L2Q9Y4W6 797 aa25.05■■□□□ 1.6
TOP3A-219ENST00000584887 GNRH1P01148 92 aa25.04■■□□□ 1.6
TOP3A-219ENST00000584887 TRIM47Q96LD4 638 aa25.04■■□□□ 1.6
TOP3A-219ENST00000584887 AATFQ9NY61 560 aaKnown RBP eCLIP25.04■■□□□ 1.6
TOP3A-219ENST00000584887 CTGFP29279 349 aa25.03■■□□□ 1.6
TOP3A-219ENST00000584887 CCDC8Q9H0W5 538 aaPredicted RBP25.03■■□□□ 1.6
TOP3A-219ENST00000584887 TLR7Q9NYK1 1049 aaKnown RBP25.03■■□□□ 1.6
TOP3A-219ENST00000584887 DBNLQ9UJU6 430 aaKnown RBP25.03■■□□□ 1.6
TOP3A-219ENST00000584887 NOP58Q9Y2X3 529 aaKnown RBP25.03■■□□□ 1.6
TOP3A-219ENST00000584887 TBC1D12O60347 775 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 BAG3O95817 575 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 CYP2E1P05181 493 aaPredicted RBP25.02■■□□□ 1.6
TOP3A-219ENST00000584887 HOXD10P28358 340 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 ZAP70P43403 619 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 PRMT2P55345 433 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 MAST2Q6P0Q8 1798 aa25.02■■□□□ 1.6
TOP3A-219ENST00000584887 RBBP6Q7Z6E9 1792 aaKnown RBP25.02■■□□□ 1.6
TOP3A-219ENST00000584887 SLC34A2O95436 690 aa25.01■■□□□ 1.59
TOP3A-219ENST00000584887 PLCG2P16885 1265 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms