RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TFCP2Q12800 502 aa19.37■□□□□ 0.69
SKA2-209ENST00000583976 KIF22Q14807 665 aa19.37■□□□□ 0.69
SKA2-209ENST00000583976 ARHGEF6Q15052 776 aa19.37■□□□□ 0.69
SKA2-209ENST00000583976 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
SKA2-209ENST00000583976 CCDC84Q86UT8 332 aaPredicted RBP19.37■□□□□ 0.69
SKA2-209ENST00000583976 ABCF2Q9UG63 623 aa19.37■□□□□ 0.69
SKA2-209ENST00000583976 MROH7-TTC4A0A0A0MT08 1334 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
SKA2-209ENST00000583976 PHF20L1A8MW92 1017 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 CYP2C8P10632 490 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 OSBPP22059 807 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 BTDP43251 543 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 PSMC4P43686 418 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 PICALMQ13492 652 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 GPAT2Q6NUI2 795 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
SKA2-209ENST00000583976 ZNF384Q8TF68 577 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
SKA2-209ENST00000583976 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 MTFR1Q15390 333 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 NBPF11Q86T75 865 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 SCYL3Q8IZE3 742 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 XAGE2Q96GT9 111 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 IDI2Q9BXS1 227 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 SIPA1L1O43166 1804 aa19.35■□□□□ 0.69
SKA2-209ENST00000583976 PDS5AQ29RF7 1337 aaKnown RBP19.34■□□□□ 0.69
SKA2-209ENST00000583976 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
SKA2-209ENST00000583976 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
SKA2-209ENST00000583976 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
SKA2-209ENST00000583976 ZGPATQ8N5A5 531 aaKnown RBP19.34■□□□□ 0.69
SKA2-209ENST00000583976 TMEM57Q8N5G2 664 aa19.34■□□□□ 0.69
SKA2-209ENST00000583976 PARK7Q99497 189 aaKnown RBP19.34■□□□□ 0.69
SKA2-209ENST00000583976 SRRDQ9UH36 339 aa19.34■□□□□ 0.69
SKA2-209ENST00000583976 CEP290O15078 2479 aa19.34■□□□□ 0.69
SKA2-209ENST00000583976 LOC285556D6RIA3 1793 aa19.34■□□□□ 0.69
SKA2-209ENST00000583976 MYPNQ86TC9 1320 aa19.33■□□□□ 0.69
SKA2-209ENST00000583976 ENTPD3O75355 529 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 BCRP11274 1271 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 RLBP1P12271 317 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 MECOMQ03112 1051 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 MTX1Q13505 466 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 PCDH10Q9P2E7 1040 aa19.33■□□□□ 0.68
SKA2-209ENST00000583976 A0A0G2JLL6 359 aaPredicted RBP19.32■□□□□ 0.68
SKA2-209ENST00000583976 ZBTB22O15209 634 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 PTPRAP18433 802 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 RHBDL3P58872 404 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 PRKCZQ05513 592 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 PRRT2Q7Z6L0 340 aaPredicted RBP19.32■□□□□ 0.68
SKA2-209ENST00000583976 PANK1Q8TE04 598 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 PICK1Q9NRD5 415 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 HMG20BQ9P0W2 317 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 ZHX2Q9Y6X8 837 aa19.32■□□□□ 0.68
SKA2-209ENST00000583976 RANBP2P49792 3224 aaKnown RBP19.31■□□□□ 0.68
SKA2-209ENST00000583976 PNMA6EA0A0J9YXQ4 647 aa19.31■□□□□ 0.68
SKA2-209ENST00000583976 FMNL1O95466 1100 aaPredicted RBP19.31■□□□□ 0.68
SKA2-209ENST00000583976 GNRH1P01148 92 aa19.31■□□□□ 0.68
SKA2-209ENST00000583976 GNAI3P08754 354 aa19.31■□□□□ 0.68
SKA2-209ENST00000583976 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
SKA2-209ENST00000583976 GADL1Q6ZQY3 521 aa19.31■□□□□ 0.68
SKA2-209ENST00000583976 TBC1D9Q6ZT07 1266 aa19.31■□□□□ 0.68
SKA2-209ENST00000583976 TRIM75PA6NK02 468 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 CXCL11O14625 94 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 PRMT2P55345 433 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 RAET1EQ8TD07 263 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 GABRQQ9UN88 632 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 CDK5RAP2Q96SN8 1893 aa19.3■□□□□ 0.68
SKA2-209ENST00000583976 GRK4P32298 578 aa19.29■□□□□ 0.68
SKA2-209ENST00000583976 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
SKA2-209ENST00000583976 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
SKA2-209ENST00000583976 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
SKA2-209ENST00000583976 MYO5AQ9Y4I1 1855 aaKnown RBP19.28■□□□□ 0.68
SKA2-209ENST00000583976 GPR75-ASB3A0A0A6YYF3 556 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 MCAMP43121 646 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 FAM163AQ96GL9 167 aaPredicted RBP19.28■□□□□ 0.68
SKA2-209ENST00000583976 AKAP2Q9Y2D5 859 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 SZT2Q5T011 3432 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 TRIOBPQ9H2D6 2365 aa19.28■□□□□ 0.68
SKA2-209ENST00000583976 COL2A1P02458 1487 aaPredicted RBP19.28■□□□□ 0.68
SKA2-209ENST00000583976 MS4A1P11836 297 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 ARID4AP29374 1257 aaPredicted RBP19.27■□□□□ 0.68
SKA2-209ENST00000583976 FCGRTP55899 365 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 MAP3K10Q02779 954 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 TREML2Q5T2D2 321 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 SPTY2D1Q68D10 685 aaPredicted RBP19.27■□□□□ 0.68
SKA2-209ENST00000583976 SLF2Q8IX21 1173 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 SPATA5Q8NB90 893 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 NSUN4Q96CB9 384 aaKnown RBP19.27■□□□□ 0.68
SKA2-209ENST00000583976 FOCADQ5VW36 1801 aa19.27■□□□□ 0.68
SKA2-209ENST00000583976 H0YGN5 161 aa19.26■□□□□ 0.67
SKA2-209ENST00000583976 GNAI2P04899 355 aa19.26■□□□□ 0.67
SKA2-209ENST00000583976 CCL5P13501 91 aa19.26■□□□□ 0.67
SKA2-209ENST00000583976 FXR1P51114 621 aaKnown RBP eCLIP19.26■□□□□ 0.67
SKA2-209ENST00000583976 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
SKA2-209ENST00000583976 COLQQ9Y215 455 aaPredicted RBP19.26■□□□□ 0.67
SKA2-209ENST00000583976 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms