RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 LRRC24Q50LG9 513 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 MIGA2Q7L4E1 593 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 FAM151AQ8WW52 585 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 HTATIP2Q9BUP3 242 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 BICC1Q9H694 974 aaKnown RBP10.98□□□□□ -0.65
NUP85-223ENST00000583877 ZNF112Q9UJU3 913 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
NUP85-223ENST00000583877 MYPNQ86TC9 1320 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 UBXN2AP68543 259 aa10.97□□□□□ -0.65
NUP85-223ENST00000583877 MOGSQ13724 837 aa10.97□□□□□ -0.65
NUP85-223ENST00000583877 NOL9Q5SY16 702 aaKnown RBP10.97□□□□□ -0.65
NUP85-223ENST00000583877 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
NUP85-223ENST00000583877 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
NUP85-223ENST00000583877 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
NUP85-223ENST00000583877 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
NUP85-223ENST00000583877 BCRP11274 1271 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 FGFR2P21802 821 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 FCGRTP55899 365 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 PUM3Q15397 648 aaKnown RBP10.96□□□□□ -0.65
NUP85-223ENST00000583877 ANKRD44Q8N8A2 993 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 PARK7Q99497 189 aaKnown RBP10.96□□□□□ -0.65
NUP85-223ENST00000583877 RNF208Q9H0X6 261 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.65
NUP85-223ENST00000583877 LOC285556D6RIA3 1793 aa10.95□□□□□ -0.66
NUP85-223ENST00000583877 CXCL11O14625 94 aa10.95□□□□□ -0.66
NUP85-223ENST00000583877 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
NUP85-223ENST00000583877 CAPN2P17655 700 aa10.95□□□□□ -0.66
NUP85-223ENST00000583877 PRKCZQ05513 592 aa10.95□□□□□ -0.66
NUP85-223ENST00000583877 BIN2Q9UBW5 565 aaPredicted RBP10.95□□□□□ -0.66
NUP85-223ENST00000583877 PLXNB2O15031 1838 aa10.95□□□□□ -0.66
NUP85-223ENST00000583877 CDK5RAP2Q96SN8 1893 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 A0A1W2PPC1 479 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 ZBTB7BO15156 539 aaPredicted RBP10.94□□□□□ -0.66
NUP85-223ENST00000583877 FARP2O94887 1054 aaPredicted RBP10.94□□□□□ -0.66
NUP85-223ENST00000583877 TCP10Q12799 353 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 CDC42EP5Q6NZY7 148 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 U2AF1L4Q8WU68 220 aaKnown RBP10.94□□□□□ -0.66
NUP85-223ENST00000583877 DAGLAQ9Y4D2 1042 aa10.94□□□□□ -0.66
NUP85-223ENST00000583877 SGPL1O95470 568 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 CYP2C8P10632 490 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 SLC5A1P13866 664 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
NUP85-223ENST00000583877 NFIAQ12857 509 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 FASTKD5Q7L8L6 764 aaKnown RBP10.93□□□□□ -0.66
NUP85-223ENST00000583877 KLHDC4Q8TBB5 520 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 LPIN2Q92539 896 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 SLC45A1Q9Y2W3 748 aa10.93□□□□□ -0.66
NUP85-223ENST00000583877 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
NUP85-223ENST00000583877 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 A0A0G2JLL6 359 aaPredicted RBP10.92□□□□□ -0.66
NUP85-223ENST00000583877 PHF20L1A8MW92 1017 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 EYA2O00167 538 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 ADCY3O60266 1144 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 PRRT2Q7Z6L0 340 aaPredicted RBP10.92□□□□□ -0.66
NUP85-223ENST00000583877 PXYLP1Q8TE99 480 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 USP40Q9NVE5 1235 aa10.92□□□□□ -0.66
NUP85-223ENST00000583877 FRMPD3Q5JV73 1810 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 FOCADQ5VW36 1801 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 PTPRCP08575 1304 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 SALL1Q9NSC2 1324 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 EVI5O60447 810 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 INHAP05111 366 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
NUP85-223ENST00000583877 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
NUP85-223ENST00000583877 PTPRAP18433 802 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 PRDX5P30044 214 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 FLT3LGP49771 235 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 IRF5Q13568 498 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 SCYL3Q8IZE3 742 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 USP44Q9H0E7 712 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 PICK1Q9NRD5 415 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
NUP85-223ENST00000583877 AFG3L2Q9Y4W6 797 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 ZHX2Q9Y6X8 837 aa10.91□□□□□ -0.66
NUP85-223ENST00000583877 MYO5AQ9Y4I1 1855 aaKnown RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 SEMA3EO15041 775 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 ENTPD3O75355 529 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 ELNP15502 786 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 RFX5P48382 616 aaPredicted RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 MAP3K10Q02779 954 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 GADL1Q6ZQY3 521 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 ATG9AQ7Z3C6 839 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 ZNF467Q7Z7K2 595 aaPredicted RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 IDI2Q9BXS1 227 aa10.9□□□□□ -0.66
NUP85-223ENST00000583877 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
NUP85-223ENST00000583877 RFX7Q2KHR2 1363 aa10.9□□□□□ -0.67
NUP85-223ENST00000583877 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms