RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 WNK4Q96J92 1243 aa20.55■□□□□ 0.88
TSEN54-211ENST00000583818 WRNIP1Q96S55 665 aa20.55■□□□□ 0.88
TSEN54-211ENST00000583818 ENTPD3O75355 529 aa20.54■□□□□ 0.88
TSEN54-211ENST00000583818 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
TSEN54-211ENST00000583818 ZKSCAN4Q969J2 545 aaPredicted RBP20.54■□□□□ 0.88
TSEN54-211ENST00000583818 NOL10Q9BSC4 688 aaKnown RBP20.54■□□□□ 0.88
TSEN54-211ENST00000583818 ATP5JP18859 108 aa20.53■□□□□ 0.88
TSEN54-211ENST00000583818 MAP3K9P80192 1104 aa20.53■□□□□ 0.88
TSEN54-211ENST00000583818 SLFNL1Q499Z3 407 aa20.53■□□□□ 0.88
TSEN54-211ENST00000583818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
TSEN54-211ENST00000583818 ATRNL1Q5VV63 1379 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 TRPA1O75762 1119 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 INPP5BP32019 993 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 MAP3K12Q12852 859 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 DCAF15Q66K64 600 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 ZNF341Q9BYN7 854 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 RNF186Q9NXI6 227 aa20.52■□□□□ 0.88
TSEN54-211ENST00000583818 CDK5RAP2Q96SN8 1893 aa20.52■□□□□ 0.87
TSEN54-211ENST00000583818 FAM196BA6NMK8 535 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 BAG3O95817 575 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 CHGBP05060 677 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 MAPKAPK5Q8IW41 473 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 TGFBRAP1Q8WUH2 860 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 CSADQ9Y600 493 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 SNCAIPQ9Y6H5 919 aa20.51■□□□□ 0.87
TSEN54-211ENST00000583818 PDE6AP16499 860 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 PPP4CP60510 307 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 TTF1Q15361 905 aaPredicted RBP20.5■□□□□ 0.87
TSEN54-211ENST00000583818 SLC4A8Q2Y0W8 1093 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 HOOK2Q96ED9 719 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 OTUD5Q96G74 571 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 HAUS7Q99871 368 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
TSEN54-211ENST00000583818 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
TSEN54-211ENST00000583818 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
TSEN54-211ENST00000583818 ZNF532Q9HCE3 1301 aa20.49■□□□□ 0.87
TSEN54-211ENST00000583818 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
TSEN54-211ENST00000583818 HDAC1Q13547 482 aaPredicted RBP20.48■□□□□ 0.87
TSEN54-211ENST00000583818 SAP30BPQ9UHR5 308 aaKnown RBP20.48■□□□□ 0.87
TSEN54-211ENST00000583818 FLT1P17948 1338 aa20.48■□□□□ 0.87
TSEN54-211ENST00000583818 UNCXA6NJT0 531 aa20.47■□□□□ 0.87
TSEN54-211ENST00000583818 IGHDP01880 384 aa20.47■□□□□ 0.87
TSEN54-211ENST00000583818 ZBTB48P10074 688 aaPredicted RBP20.47■□□□□ 0.87
TSEN54-211ENST00000583818 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.47■□□□□ 0.87
TSEN54-211ENST00000583818 FOCADQ5VW36 1801 aa20.47■□□□□ 0.87
TSEN54-211ENST00000583818 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 TBC1D8O95759 1140 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 PLCG2P16885 1265 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 TM4SF4P48230 202 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 SREBF2Q12772 1141 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 RIOK1Q9BRS2 568 aaKnown RBP20.46■□□□□ 0.87
TSEN54-211ENST00000583818 ZNF112Q9UJU3 913 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 SIPA1L1O43166 1804 aa20.46■□□□□ 0.87
TSEN54-211ENST00000583818 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 MAGEB6P1A0A0J9YX57 407 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 SPDYE5A6NIY4 337 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.86
TSEN54-211ENST00000583818 CA12O43570 354 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
TSEN54-211ENST00000583818 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 GPATCH3Q96I76 525 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
TSEN54-211ENST00000583818 MANSC4A6NHS7 340 aaPredicted RBP20.44■□□□□ 0.86
TSEN54-211ENST00000583818 USP5P45974 858 aa20.44■□□□□ 0.86
TSEN54-211ENST00000583818 CCDC84Q86UT8 332 aaPredicted RBP20.44■□□□□ 0.86
TSEN54-211ENST00000583818 ERO1BQ86YB8 467 aa20.44■□□□□ 0.86
TSEN54-211ENST00000583818 REM2Q8IYK8 340 aaPredicted RBP20.44■□□□□ 0.86
TSEN54-211ENST00000583818 MS4A4AQ96JQ5 239 aa20.44■□□□□ 0.86
TSEN54-211ENST00000583818 R3HDMLQ9H3Y0 253 aa20.44■□□□□ 0.86
TSEN54-211ENST00000583818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSEN54-211ENST00000583818 IRF6O14896 467 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 IGSF3O75054 1194 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 ADD2P35612 726 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 IFNL1Q8IU54 200 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 LCORLQ8N3X6 602 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 PTPN18Q99952 460 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
TSEN54-211ENST00000583818 ARMT1Q9H993 441 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 SAGE1Q9NXZ1 904 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 LAMB1P07942 1786 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 MYH7P12883 1935 aa20.43■□□□□ 0.86
TSEN54-211ENST00000583818 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
TSEN54-211ENST00000583818 CCL15-CCL14A0A0B4J2E2 113 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 MX1P20591 662 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 AAMPQ13685 434 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 RRP1BQ14684 758 aaKnown RBP20.42■□□□□ 0.86
TSEN54-211ENST00000583818 CCL15Q16663 113 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 BRI3BPQ8WY22 251 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 LNPKQ9C0E8 428 aa20.42■□□□□ 0.86
TSEN54-211ENST00000583818 ZBTB47Q9UFB7 747 aaPredicted RBP20.42■□□□□ 0.86
TSEN54-211ENST00000583818 MYH1P12882 1939 aa20.41■□□□□ 0.86
TSEN54-211ENST00000583818 MBD4O95243 580 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms