RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
CCDC57-217ENST00000583053 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
CCDC57-217ENST00000583053 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
CCDC57-217ENST00000583053 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
CCDC57-217ENST00000583053 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-217ENST00000583053 DDTLA6NHG4 134 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 VGLL4Q14135 290 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 CERS3Q8IU89 383 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-217ENST00000583053 CSADQ9Y600 493 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.25
CCDC57-217ENST00000583053 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
CCDC57-217ENST00000583053 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
CCDC57-217ENST00000583053 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
CCDC57-217ENST00000583053 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-217ENST00000583053 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
CCDC57-217ENST00000583053 PDE6AP16499 860 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 TM4SF4P48230 202 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
CCDC57-217ENST00000583053 MAP3K10Q02779 954 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 SREBF2Q12772 1141 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 TGFBRAP1Q8WUH2 860 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 ZKSCAN4Q969J2 545 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-217ENST00000583053 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
CCDC57-217ENST00000583053 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CCDC57-217ENST00000583053 HSPA8P11142 646 aaKnown RBP16.61■□□□□ 0.25
CCDC57-217ENST00000583053 INHBEP58166 350 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC57-217ENST00000583053 SAGE1Q9NXZ1 904 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 TTC41PQ6P2S7 1318 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 ZNF532Q9HCE3 1301 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
CCDC57-217ENST00000583053 TCRBV5S4A2TA0A5A2 114 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 TBC1D12O60347 775 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 IGHDP01880 384 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 INPP5BP32019 993 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 ADD2P35612 726 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 GJA5P36382 358 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 LBX1P52954 281 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
CCDC57-217ENST00000583053 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
CCDC57-217ENST00000583053 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
CCDC57-217ENST00000583053 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 RNF186Q9NXI6 227 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 SNCAIPQ9Y6H5 919 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 FLT1P17948 1338 aa16.6■□□□□ 0.25
CCDC57-217ENST00000583053 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
CCDC57-217ENST00000583053 MAGEB6P1A0A0J9YX57 407 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 ERC2O15083 957 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 TRPA1O75762 1119 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 ZSCAN25Q6NSZ9 544 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-217ENST00000583053 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 PI4KBQ9UBF8 816 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
CCDC57-217ENST00000583053 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
CCDC57-217ENST00000583053 MX1P20591 662 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 USP5P45974 858 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
CCDC57-217ENST00000583053 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
CCDC57-217ENST00000583053 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
CCDC57-217ENST00000583053 PPATQ06203 517 aa16.57■□□□□ 0.24
CCDC57-217ENST00000583053 COL13A1Q5TAT6 717 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-217ENST00000583053 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
CCDC57-217ENST00000583053 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
CCDC57-217ENST00000583053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC57-217ENST00000583053 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
CCDC57-217ENST00000583053 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-217ENST00000583053 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
CCDC57-217ENST00000583053 GTF2A2P52657 109 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 FOXP4Q8IVH2 680 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-217ENST00000583053 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
CCDC57-217ENST00000583053 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
CCDC57-217ENST00000583053 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
CCDC57-217ENST00000583053 IRF6O14896 467 aa16.55■□□□□ 0.24
CCDC57-217ENST00000583053 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
CCDC57-217ENST00000583053 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
CCDC57-217ENST00000583053 PPIL2Q13356 520 aa16.55■□□□□ 0.24
CCDC57-217ENST00000583053 SLFNL1Q499Z3 407 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms