RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FLIIQ13045 1269 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-205ENST00000582331 GRIK5Q16478 980 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 TWISTNBQ3B726 338 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-205ENST00000582331 FKBP1CQ5VVH2 108 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 TEKT1Q969V4 418 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 TMEM121BQ9BXQ6 578 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-205ENST00000582331 A0A1B0GUL6 1792 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 ADCY3O60266 1144 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 BCRP11274 1271 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 INPP5BP32019 993 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 BMP8BP34820 402 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 CHAF1AQ13111 956 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-205ENST00000582331 MIGA2Q7L4E1 593 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 VPS37DQ86XT2 251 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 DEFB123Q8N688 67 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
CCDC47-205ENST00000582331 ZDHHC15Q96MV8 337 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 DEFB118Q96PH6 123 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 PARK7Q99497 189 aaKnown RBP9.65□□□□□ -0.86
CCDC47-205ENST00000582331 MRIQ9BWK5 157 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 GABRQQ9UN88 632 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
CCDC47-205ENST00000582331 STK25O00506 426 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 FRAT2O75474 233 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-205ENST00000582331 INHAP05111 366 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 MOGSQ13724 837 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 NECAB2Q7Z6G3 386 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 PAWRQ96IZ0 340 aaKnown RBP9.64□□□□□ -0.87
CCDC47-205ENST00000582331 GDF15Q99988 308 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 ZNF112Q9UJU3 913 aa9.64□□□□□ -0.87
CCDC47-205ENST00000582331 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-205ENST00000582331 CXCL11O14625 94 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 CYP2C8P10632 490 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 ELNP15502 786 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 FLT3LGP49771 235 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 APOBEC3HQ6NTF7 200 aaKnown RBP9.63□□□□□ -0.87
CCDC47-205ENST00000582331 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 CRISPLD2Q9H0B8 497 aa9.63□□□□□ -0.87
CCDC47-205ENST00000582331 MAST3O60307 1309 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 GRM8O00222 908 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 BCAMP50895 628 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 IRF5Q13568 498 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 LRIT3Q3SXY7 679 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 BEND3Q5T5X7 828 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 Q7L0L9 218 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 FASTKD5Q7L8L6 764 aaKnown RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 C7orf61Q8IZ16 206 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 FAM151AQ8WW52 585 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 PUS3Q9BZE2 481 aaKnown RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 MTMR10Q9NXD2 777 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 ZMYND8Q9ULU4 1186 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 SUGT1Q9Y2Z0 365 aa9.62□□□□□ -0.87
CCDC47-205ENST00000582331 RPAP1Q9BWH6 1393 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-205ENST00000582331 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
CCDC47-205ENST00000582331 MROH5Q6ZUA9 1318 aa9.61□□□□□ -0.87
CCDC47-205ENST00000582331 F6X3S4 739 aa9.61□□□□□ -0.87
CCDC47-205ENST00000582331 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
CCDC47-205ENST00000582331 TCP10Q12799 353 aa9.61□□□□□ -0.87
CCDC47-205ENST00000582331 NOL9Q5SY16 702 aaKnown RBP9.61□□□□□ -0.87
CCDC47-205ENST00000582331 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
CCDC47-205ENST00000582331 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-205ENST00000582331 C9orf78Q9NZ63 289 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-205ENST00000582331 MGAMO43451 1857 aa9.6□□□□□ -0.87
CCDC47-205ENST00000582331 TDHQ8IZJ6 230 aa9.6□□□□□ -0.87
CCDC47-205ENST00000582331 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
CCDC47-205ENST00000582331 DIS3LQ8TF46 1054 aaKnown RBP9.6□□□□□ -0.87
CCDC47-205ENST00000582331 COA7Q96BR5 231 aa9.6□□□□□ -0.87
CCDC47-205ENST00000582331 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC47-205ENST00000582331 ZHX2Q9Y6X8 837 aa9.6□□□□□ -0.87
CCDC47-205ENST00000582331 UNC80Q8N2C7 3258 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 A0A0G2JLL6 359 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-205ENST00000582331 SYN1P17600 705 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 MAGEA10P43363 369 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-205ENST00000582331 METTL24Q5JXM2 366 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 PRRT2Q7Z6L0 340 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-205ENST00000582331 SMCR8Q8TEV9 937 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-205ENST00000582331 NBPF3Q9H094 633 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 PICK1Q9NRD5 415 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 SLC45A1Q9Y2W3 748 aa9.59□□□□□ -0.87
CCDC47-205ENST00000582331 VAMP4O75379 141 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 PDE8BO95263 885 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 CDC42EP5Q6NZY7 148 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC47-205ENST00000582331 WWC1Q8IX03 1113 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 SCYL3Q8IZE3 742 aa9.58□□□□□ -0.88
CCDC47-205ENST00000582331 WDR66Q8TBY9 1149 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms