RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PTPRAP18433 802 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 OGDHLQ9ULD0 1010 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 MAST3O60307 1309 aa16.68■□□□□ 0.26
CDK5RAP3-213ENST00000579605 LRRC26Q2I0M4 334 aa16.67■□□□□ 0.26
CDK5RAP3-213ENST00000579605 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
CDK5RAP3-213ENST00000579605 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
CDK5RAP3-213ENST00000579605 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
CDK5RAP3-213ENST00000579605 MGAMO43451 1857 aa16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 CCDC84Q86UT8 332 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 LBHD1Q9BQE6 289 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 USP40Q9NVE5 1235 aa16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
CDK5RAP3-213ENST00000579605 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 CYP2B6P20813 491 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 METTL24Q5JXM2 366 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 MYLIPQ8WY64 445 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 GJD2Q9UKL4 321 aa16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 LRRFIP2Q9Y608 721 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-213ENST00000579605 A0A1B0GUL6 1792 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 GRM8O00222 908 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 FAM110CQ1W6H9 321 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 TRIB2Q92519 343 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 MROH5Q6ZUA9 1318 aa16.64■□□□□ 0.25
CDK5RAP3-213ENST00000579605 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-213ENST00000579605 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
CDK5RAP3-213ENST00000579605 ZSCAN29Q8IWY8 852 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-213ENST00000579605 COL6A1P12109 1028 aa16.62■□□□□ 0.25
CDK5RAP3-213ENST00000579605 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
CDK5RAP3-213ENST00000579605 EYSQ5T1H1 3165 aa16.62■□□□□ 0.25
CDK5RAP3-213ENST00000579605 DDX60LQ5H9U9 1706 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-213ENST00000579605 PDE8BO95263 885 aa16.6■□□□□ 0.25
CDK5RAP3-213ENST00000579605 FOSL2P15408 326 aa16.6■□□□□ 0.25
CDK5RAP3-213ENST00000579605 RGS3P49796 1198 aa16.6■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
CDK5RAP3-213ENST00000579605 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-213ENST00000579605 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 CCND3P30281 292 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 ATN1P54259 1190 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 MAP3K21Q5TCX8 1036 aa16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 WDR66Q8TBY9 1149 aa16.59■□□□□ 0.25
CDK5RAP3-213ENST00000579605 PEX10O60683 326 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PRDX5P30044 214 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 SPP2Q13103 211 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 SHHQ15465 462 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PRKAG2Q9UGJ0 569 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 ATRNL1Q5VV63 1379 aa16.58■□□□□ 0.24
CDK5RAP3-213ENST00000579605 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 LHX8Q68G74 356 aa16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 KLHDC4Q8TBB5 520 aa16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 NUDT12Q9BQG2 462 aa16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 TTYH1Q9H313 450 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-213ENST00000579605 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 TMEM265A0A087WTH1 108 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 LDHBP07195 334 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 HMGCS2P54868 508 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PICALMQ13492 652 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PROCA1Q8NCQ7 364 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 FAM122AQ96E09 287 aa16.56■□□□□ 0.24
CDK5RAP3-213ENST00000579605 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 DOCK3Q8IZD9 2030 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PRUNE2Q8WUY3 3088 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 ENTPD3O75355 529 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 CCL14Q16627 93 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 TJAP1Q5JTD0 557 aa16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PLA2G5P39877 138 aa16.54■□□□□ 0.24
CDK5RAP3-213ENST00000579605 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
CDK5RAP3-213ENST00000579605 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-213ENST00000579605 VAMP4O75379 141 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms