RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MECOMQ03112 1051 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 MTX1Q13505 466 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 NOL9Q5SY16 702 aaKnown RBP11.05□□□□□ -0.64
GGA3-207ENST00000578896 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 TMEM57Q8N5G2 664 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 IDI2Q9BXS1 227 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
GGA3-207ENST00000578896 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
GGA3-207ENST00000578896 ENTPD3O75355 529 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 PSMC4P43686 418 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 RHBDL3P58872 404 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 G3BP1Q13283 466 aaKnown RBP eCLIP11.04□□□□□ -0.64
GGA3-207ENST00000578896 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
GGA3-207ENST00000578896 KIF22Q14807 665 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
GGA3-207ENST00000578896 SPATA5Q8NB90 893 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 TRIM47Q96LD4 638 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 MROH7-TTC4A0A0A0MT08 1334 aa11.04□□□□□ -0.64
GGA3-207ENST00000578896 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
GGA3-207ENST00000578896 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 GPR75-ASB3A0A0A6YYF3 556 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 FMNL1O95466 1100 aaPredicted RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 PTPRAP18433 802 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 OSBPP22059 807 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 MCAMP43121 646 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 MTFR1Q15390 333 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 SPTY2D1Q68D10 685 aaPredicted RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 SCYL3Q8IZE3 742 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 MIER1Q8N108 512 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 NSUN4Q96CB9 384 aaKnown RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 ZCCHC17Q9NP64 241 aaKnown RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
GGA3-207ENST00000578896 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
GGA3-207ENST00000578896 PTPRFP10586 1907 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 TRIM75PA6NK02 468 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 CXCL11O14625 94 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.65
GGA3-207ENST00000578896 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
GGA3-207ENST00000578896 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 NBPF11Q86T75 865 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 AFG3L2Q9Y4W6 797 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 PHIPQ8WWQ0 1821 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 MGAMO43451 1857 aa11.02□□□□□ -0.65
GGA3-207ENST00000578896 A0A0G2JLL6 359 aaPredicted RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 BCRP11274 1271 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 RLBP1P12271 317 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 MAP3K10Q02779 954 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 OS9Q13438 667 aaPredicted RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 RAET1EQ8TD07 263 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 LRP2BPQ9P2M1 347 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 SRRDQ9UH36 339 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 GABRQQ9UN88 632 aa11.01□□□□□ -0.65
GGA3-207ENST00000578896 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
GGA3-207ENST00000578896 DOCK1Q14185 1865 aa11□□□□□ -0.65
GGA3-207ENST00000578896 ZBTB22O15209 634 aa11□□□□□ -0.65
GGA3-207ENST00000578896 SURF6O75683 361 aaKnown RBP11□□□□□ -0.65
GGA3-207ENST00000578896 ATP8B2P98198 1209 aa11□□□□□ -0.65
GGA3-207ENST00000578896 PRKCZQ05513 592 aa11□□□□□ -0.65
GGA3-207ENST00000578896 POLA2Q14181 598 aa11□□□□□ -0.65
GGA3-207ENST00000578896 TNNI3KQ59H18 835 aa11□□□□□ -0.65
GGA3-207ENST00000578896 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
GGA3-207ENST00000578896 TREML2Q5T2D2 321 aa11□□□□□ -0.65
GGA3-207ENST00000578896 TEX11Q8IYF3 940 aa11□□□□□ -0.65
GGA3-207ENST00000578896 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
GGA3-207ENST00000578896 CCDC8Q9H0W5 538 aaPredicted RBP11□□□□□ -0.65
GGA3-207ENST00000578896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11□□□□□ -0.65
GGA3-207ENST00000578896 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
GGA3-207ENST00000578896 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
GGA3-207ENST00000578896 FPGT-TNNI3KV9GXZ4 949 aa11□□□□□ -0.65
GGA3-207ENST00000578896 MYPNQ86TC9 1320 aa11□□□□□ -0.65
GGA3-207ENST00000578896 CTNND1O60716 968 aaKnown RBP10.99□□□□□ -0.65
GGA3-207ENST00000578896 LDHCP07864 332 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 UQCRFS1P1P0C7P4 283 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 GRK4P32298 578 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 GSTO1P78417 241 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 SPP2Q13103 211 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
GGA3-207ENST00000578896 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
GGA3-207ENST00000578896 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 MAPKAPK5Q8IW41 473 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms