RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 SNX21Q969T3 373 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 COG3Q96JB2 828 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 GSX2Q9BZM3 304 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 LNPKQ9C0E8 428 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 AKTIPQ9H8T0 292 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 POLKQ9UBT6 870 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 NALCNQ8IZF0 1738 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 KIF24Q5T7B8 1368 aa7.03□□□□□ -1.28
CTNS-210ENST00000576979 CPSF1Q10570 1443 aaKnown RBP7.02□□□□□ -1.29
CTNS-210ENST00000576979 DLL1O00548 723 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 VAMP4O75379 141 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 BRD1O95696 1058 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 HSP90AA1P07900 732 aaKnown RBP7.02□□□□□ -1.29
CTNS-210ENST00000576979 PERM1Q5SV97 790 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 SLC51AQ86UW1 340 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 WFDC8Q8IUA0 241 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 USTQ9Y2C2 406 aa7.02□□□□□ -1.29
CTNS-210ENST00000576979 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.02□□□□□ -1.29
CTNS-210ENST00000576979 ABCC4O15439 1325 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 NCOA3Q9Y6Q9 1424 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 UBR1Q8IWV7 1749 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 CDC45O75419 566 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 IL13P35225 146 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 TWISTNBQ3B726 338 aaPredicted RBP7.01□□□□□ -1.29
CTNS-210ENST00000576979 C1orf53Q5VUE5 145 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 GLMNQ92990 594 aa7.01□□□□□ -1.29
CTNS-210ENST00000576979 TSPAN10Q9H1Z9 355 aaPredicted RBP7.01□□□□□ -1.29
CTNS-210ENST00000576979 N4BP2Q86UW6 1770 aaPredicted RBP7□□□□□ -1.29
CTNS-210ENST00000576979 RIMS1Q86UR5 1692 aaKnown RBP7□□□□□ -1.29
CTNS-210ENST00000576979 ZBTB42B2RXF5 422 aa7□□□□□ -1.29
CTNS-210ENST00000576979 F8W735 103 aaPredicted RBP7□□□□□ -1.29
CTNS-210ENST00000576979 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
CTNS-210ENST00000576979 IGLV1-40P01703 118 aa7□□□□□ -1.29
CTNS-210ENST00000576979 ZNF853P0CG23 659 aa7□□□□□ -1.29
CTNS-210ENST00000576979 SPINK2P20155 84 aa7□□□□□ -1.29
CTNS-210ENST00000576979 MLLT1Q03111 559 aaPredicted RBP7□□□□□ -1.29
CTNS-210ENST00000576979 SKOR2Q2VWA4 1001 aaPredicted RBP7□□□□□ -1.29
CTNS-210ENST00000576979 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
CTNS-210ENST00000576979 NME9Q86XW9 330 aa7□□□□□ -1.29
CTNS-210ENST00000576979 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
CTNS-210ENST00000576979 PBXIP1Q96AQ6 731 aa7□□□□□ -1.29
CTNS-210ENST00000576979 PNMA5Q96PV4 448 aa7□□□□□ -1.29
CTNS-210ENST00000576979 GDPD2Q9HCC8 539 aa7□□□□□ -1.29
CTNS-210ENST00000576979 ISY1Q9ULR0 285 aaKnown RBP7□□□□□ -1.29
CTNS-210ENST00000576979 RGPD1P0DJD0 1748 aa7□□□□□ -1.29
CTNS-210ENST00000576979 TECPR2O15040 1411 aa7□□□□□ -1.29
CTNS-210ENST00000576979 GOLGA6L22H0YM25 854 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 EML3Q32P44 896 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 CASC1Q6TDU7 716 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 ZDHHC13Q8IUH4 622 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 NUDT16Q96DE0 195 aaKnown RBP6.99□□□□□ -1.29
CTNS-210ENST00000576979 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 THUMPD2Q9BTF0 503 aaKnown RBP6.99□□□□□ -1.29
CTNS-210ENST00000576979 PRM3Q9NNZ6 103 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 AMOTL2Q9Y2J4 779 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 RAXQ9Y2V3 346 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 KIF13AQ9H1H9 1805 aa6.99□□□□□ -1.29
CTNS-210ENST00000576979 RGPD8O14715 1765 aaPredicted RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 FAM208AQ9UK61 1670 aaKnown RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 ELL2O00472 640 aaPredicted RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 MRE11P49959 708 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 HIRAP54198 1017 aaPredicted RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 POTEAQ6S8J7 498 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 TSPYL6Q8N831 410 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 ADGRE2Q9UHX3 823 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
CTNS-210ENST00000576979 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.98□□□□□ -1.29
CTNS-210ENST00000576979 TUBGCP6Q96RT7 1819 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 FSD2A1L4K1 749 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
CTNS-210ENST00000576979 FBLN1P23142 703 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 ABL2P42684 1182 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 CCINQ13939 588 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 MLECQ14165 292 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 RABEP1Q15276 862 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 ELMSAN1Q6PJG2 1045 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 TXNDC2Q86VQ3 553 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 FRRS1LQ9P0K9 344 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 PTPRCP08575 1304 aa6.97□□□□□ -1.29
CTNS-210ENST00000576979 METP08581 1390 aa6.96□□□□□ -1.29
CTNS-210ENST00000576979 KIAA0232Q92628 1395 aa6.96□□□□□ -1.29
CTNS-210ENST00000576979 HMMRO75330 724 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 GLB1P16278 677 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 SEMA3FQ13275 785 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 NCOA4Q13772 614 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 RAB3GAP1Q15042 981 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 RRS1Q15050 365 aaKnown RBP6.96□□□□□ -1.3
CTNS-210ENST00000576979 TTC22Q5TAA0 569 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 INTS3Q68E01 1043 aaKnown RBP6.96□□□□□ -1.3
CTNS-210ENST00000576979 OGFOD2Q6N063 350 aa6.96□□□□□ -1.3
CTNS-210ENST00000576979 Q6ZS46 218 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms