RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 ISCA1Q9BUE6 129 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
NUP88-212ENST00000576708 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 SERPINA10Q9UK55 444 aa8.07□□□□□ -1.12
NUP88-212ENST00000576708 SHTN1A0MZ66 631 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 TRAF5O00463 557 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 FOXN1O15353 648 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 RAD17O75943 681 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 ZNF853P0CG23 659 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 SCTRP47872 440 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 GMPSP49915 693 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 WDR4P57081 412 aaKnown RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 GPR101Q96P66 508 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 RTFDC1Q9BY42 306 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 DBF4Q9UBU7 674 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 ZNRF3Q9ULT6 936 aa8.06□□□□□ -1.12
NUP88-212ENST00000576708 MAFBQ9Y5Q3 323 aaPredicted RBP8.06□□□□□ -1.12
NUP88-212ENST00000576708 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 YDJCA8MPS7 323 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
NUP88-212ENST00000576708 HOXB7P09629 217 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 GPSM2P81274 684 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 CBLBQ13191 982 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 NCOA4Q13772 614 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 SUPT20HQ8NEM7 779 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 KLF16Q9BXK1 252 aaPredicted RBP8.05□□□□□ -1.12
NUP88-212ENST00000576708 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 GPRC5DQ9NZD1 345 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 ABT1Q9ULW3 272 aaKnown RBP8.05□□□□□ -1.12
NUP88-212ENST00000576708 DDX60Q8IY21 1712 aaKnown RBP8.05□□□□□ -1.12
NUP88-212ENST00000576708 DUOX1Q9NRD9 1551 aa8.05□□□□□ -1.12
NUP88-212ENST00000576708 PCNTO95613 3336 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
NUP88-212ENST00000576708 TIMP2P16035 220 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
NUP88-212ENST00000576708 KIAA2012Q0VF49 1180 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 SF3B3Q15393 1217 aaKnown RBP8.04□□□□□ -1.12
NUP88-212ENST00000576708 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 CST9Q5W186 159 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 DLK2Q6UY11 383 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 USP50Q70EL3 339 aaPredicted RBP8.04□□□□□ -1.12
NUP88-212ENST00000576708 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 MYD88Q99836 296 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 KCNQ5Q9NR82 932 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 IFT57Q9NWB7 429 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
NUP88-212ENST00000576708 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
NUP88-212ENST00000576708 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 LILRA1O75019 489 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 GNAI1P63096 354 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 GRM1Q13255 1194 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 MAP7D1Q3KQU3 841 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
NUP88-212ENST00000576708 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 GLIS2Q9BZE0 524 aaPredicted RBP8.03□□□□□ -1.12
NUP88-212ENST00000576708 VPS33BQ9H267 617 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 DBNDD1Q9H9R9 158 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 ADARB2Q9NS39 739 aaKnown RBP8.03□□□□□ -1.12
NUP88-212ENST00000576708 POLLQ9UGP5 575 aa8.03□□□□□ -1.12
NUP88-212ENST00000576708 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
NUP88-212ENST00000576708 EGFRP00533 1210 aa8.02□□□□□ -1.13
NUP88-212ENST00000576708 ADD1P35611 737 aaKnown RBP8.02□□□□□ -1.13
NUP88-212ENST00000576708 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.13
NUP88-212ENST00000576708 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
NUP88-212ENST00000576708 TNIP1Q15025 636 aa8.02□□□□□ -1.13
NUP88-212ENST00000576708 EML3Q32P44 896 aa8.02□□□□□ -1.13
NUP88-212ENST00000576708 CYP4F22Q6NT55 531 aa8.02□□□□□ -1.13
NUP88-212ENST00000576708 CNOT7Q9UIV1 285 aaKnown RBP8.02□□□□□ -1.13
NUP88-212ENST00000576708 LRRC37AA6NMS7 1700 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
NUP88-212ENST00000576708 WTIPA6NIX2 430 aaPredicted RBP8.01□□□□□ -1.13
NUP88-212ENST00000576708 PSMD14O00487 310 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 AOC2O75106 756 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 DGAT1O75907 488 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 CELF2O95319 508 aaKnown RBP8.01□□□□□ -1.13
NUP88-212ENST00000576708 MYCP01106 439 aaPredicted RBP8.01□□□□□ -1.13
NUP88-212ENST00000576708 LBX1P52954 281 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 ERVK-9P63128 1117 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 G2E3Q7L622 706 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 PLEKHM2Q8IWE5 1019 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 ZBTB38Q8NAP3 1195 aaPredicted RBP8.01□□□□□ -1.13
NUP88-212ENST00000576708 TBC1D16Q8TBP0 767 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 CAPNS2Q96L46 248 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms