RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, human

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDE1-208	ENST00000573694	SLK	Q9H2G2	1235 aa	Predicted RBP	11.47	□□□□□ -0.57
NDE1-208	ENST00000573694	PIH1D3	Q9NQM4	214 aa	Known RBP	11.47	□□□□□ -0.57
NDE1-208	ENST00000573694	SNX14	Q9Y5W7	946 aa		11.47	□□□□□ -0.57
NDE1-208	ENST00000573694	RNF113A	O15541	343 aa	Known RBP	11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	AOC2	O75106	756 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	CYP2E1	P05181	493 aa	Predicted RBP	11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	UQCRFS1P1	P0C7P4	283 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	RGS19	P49795	217 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	BCAM	P50895	628 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	MFSD14B	Q5SR56	506 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	OTUD7B	Q6GQQ9	843 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	CSRNP1	Q96S65	589 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	UPF3B	Q9BZI7	483 aa	Known RBP	11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	GNL3L	Q9NVN8	582 aa	Known RBP	11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	HMG20B	Q9P0W2	317 aa		11.46	□□□□□ -0.57
NDE1-208	ENST00000573694	PDS5A	Q29RF7	1337 aa	Known RBP	11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	MANSC4	A6NHS7	340 aa	Predicted RBP	11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	GYG1	P46976	350 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	IREB2	P48200	963 aa	Known RBP	11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	CFAP100	Q494V2	611 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	MCMDC2	Q4G0Z9	681 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	HHIPL2	Q6UWX4	724 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	FAM83A	Q86UY5	434 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	RASAL3	Q86YV0	1011 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	CERS5	Q8N5B7	392 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	MAP4K1	Q92918	833 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	KCNB2	Q92953	911 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	FBXW7	Q969H0	707 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	OSBP2	Q969R2	916 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	RNF186	Q9NXI6	227 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	TAF6L	Q9Y6J9	622 aa		11.45	□□□□□ -0.58
NDE1-208	ENST00000573694	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	SLC27A2	O14975	620 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	NEK4	P51957	841 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	GRM1	Q13255	1194 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	NECTIN1	Q15223	517 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	ADCK5	Q3MIX3	580 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	SPDYE2	Q495Y8	402 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	VPS53	Q5VIR6	699 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	CREB3L3	Q68CJ9	461 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	ZGPAT	Q8N5A5	531 aa	Known RBP	11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	SPATA5	Q8NB90	893 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	SLC10A4	Q96EP9	437 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	ABHD8	Q96I13	439 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	ZDHHC15	Q96MV8	337 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	HELLS	Q9NRZ9	838 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	FOXD4L1	Q9NU39	408 aa		11.44	□□□□□ -0.58
NDE1-208	ENST00000573694	SALL1	Q9NSC2	1324 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ST18	O60284	1047 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	FRAT2	O75474	233 aa	Predicted RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	IDH1	O75874	414 aa	Known RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	CPA1	P15085	419 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ADD2	P35612	726 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	COL9A3	Q14050	684 aa	Predicted RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	TTLL12	Q14166	644 aa	Predicted RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	NOL8	Q76FK4	1167 aa	Known RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	SLF2	Q8IX21	1173 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ANKRD13A	Q8IZ07	590 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	APPBP2	Q92624	585 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	TEKT1	Q969V4	418 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	PRMT6	Q96LA8	375 aa	Predicted RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ZCCHC17	Q9NP64	241 aa	Known RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	TMOD2	Q9NZR1	351 aa		11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	TTF2	Q9UNY4	1162 aa	Known RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ZNF646	O15015	1829 aa	Predicted RBP	11.43	□□□□□ -0.58
NDE1-208	ENST00000573694	ASTN2	O75129	1339 aa	Predicted RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	LAMB1	P07942	1786 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	ZFY	P08048	801 aa	Predicted RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	PDE6A	P16499	860 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	ARHGEF6	Q15052	776 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	TTF1	Q15361	905 aa	Predicted RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	SPRYD7	Q5W111	196 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	TMED8	Q6PL24	325 aa	Predicted RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	TICAM2	Q86XR7	235 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	JAKMIP1	Q96N16	626 aa	Known RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	TTC14	Q96N46	770 aa		11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.42	□□□□□ -0.58
NDE1-208	ENST00000573694	ZNF532	Q9HCE3	1301 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	CDK5RAP2	Q96SN8	1893 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	TCRBV5S4A2T	A0A5A2	114 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	TESPA1	A2RU30	521 aa	Predicted RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	UBE2Q2L	H0YL09	131 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	FOXP2	O15409	715 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	WDHD1	O75717	1129 aa	Predicted RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	TRPA1	O75762	1119 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	CAST	P20810	708 aa	Known RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	CRK	P46108	304 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	RBM5	P52756	815 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	RASA3	Q14644	834 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	CTU1	Q7Z7A3	348 aa	Known RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	DSCC1	Q9BVC3	393 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	MXD3	Q9BW11	206 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	2e-11	■■■■□ 25.3
NDE1-208	ENST00000573694	PUS7L	Q9H0K6	701 aa	Known RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	ZNF70	Q9UC06	446 aa	Predicted RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	DENND2A	Q9ULE3	1009 aa		11.41	□□□□□ -0.58
NDE1-208	ENST00000573694		U3KPZ7	1027 aa	Predicted RBP	11.41	□□□□□ -0.58
NDE1-208	ENST00000573694	ECM29	Q5VYK3	1845 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms