RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 USP2O75604 605 aaPredicted RBP10.66□□□□□ -0.7
SMG6-210ENST00000572205 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
SMG6-210ENST00000572205 MAP2K2P36507 400 aa10.66□□□□□ -0.7
SMG6-210ENST00000572205 RBM5P52756 815 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG6-210ENST00000572205 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
SMG6-210ENST00000572205 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.66□□□□□ -0.7
SMG6-210ENST00000572205 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
SMG6-210ENST00000572205 C2orf69Q8N8R5 385 aa10.66□□□□□ -0.7
SMG6-210ENST00000572205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG6-210ENST00000572205 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 MYO1BO43795 1136 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
SMG6-210ENST00000572205 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 HMMRO75330 724 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 CHGBP05060 677 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 ECE1P42892 770 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 BTDP43251 543 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 NOGQ13253 232 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
SMG6-210ENST00000572205 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
SMG6-210ENST00000572205 DDTLA6NHG4 134 aaPredicted RBP10.64□□□□□ -0.71
SMG6-210ENST00000572205 RGS3P49796 1198 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 PRKG1Q13976 671 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 VGLL4Q14135 290 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
SMG6-210ENST00000572205 OTUD7AQ8TE49 926 aaPredicted RBP10.64□□□□□ -0.71
SMG6-210ENST00000572205 FAM151AQ8WW52 585 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 ZNF112Q9UJU3 913 aa10.64□□□□□ -0.71
SMG6-210ENST00000572205 ANGEL1Q9UNK9 670 aaKnown RBP10.64□□□□□ -0.71
SMG6-210ENST00000572205 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 APBB1O00213 710 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 ZNF157P51786 506 aaPredicted RBP10.63□□□□□ -0.71
SMG6-210ENST00000572205 PPP4CP60510 307 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
SMG6-210ENST00000572205 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 COL13A1Q5TAT6 717 aaPredicted RBP10.63□□□□□ -0.71
SMG6-210ENST00000572205 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 RIOK1Q9BRS2 568 aaKnown RBP10.63□□□□□ -0.71
SMG6-210ENST00000572205 CHMP4BQ9H444 224 aaKnown RBP10.63□□□□□ -0.71
SMG6-210ENST00000572205 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 MGAMO43451 1857 aa10.63□□□□□ -0.71
SMG6-210ENST00000572205 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 RLFQ13129 1914 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 FLT1P17948 1338 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 A0A0G2JMZ2 1700 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 UNCXA6NJT0 531 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 IGSF3O75054 1194 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 ENTPD3O75355 529 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 ATP5JP18859 108 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 TCP10Q12799 353 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 GRM1Q13255 1194 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 HDAC1Q13547 482 aaPredicted RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 RRP1BQ14684 758 aaKnown RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 SLFNL1Q499Z3 407 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 REM2Q8IYK8 340 aaPredicted RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 PI4K2BQ8TCG2 481 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
SMG6-210ENST00000572205 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 USP40Q9NVE5 1235 aa10.62□□□□□ -0.71
SMG6-210ENST00000572205 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMG6-210ENST00000572205 INPP5BP32019 993 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 NF2P35240 595 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 DYNLL1P63167 89 aaKnown RBP10.61□□□□□ -0.71
SMG6-210ENST00000572205 MAP2K1Q02750 393 aaPredicted RBP10.61□□□□□ -0.71
SMG6-210ENST00000572205 EVX2Q03828 476 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 MOGSQ13724 837 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 METTL16Q86W50 562 aaKnown RBP10.61□□□□□ -0.71
SMG6-210ENST00000572205 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 HAUS7Q99871 368 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 OSBPL5Q9H0X9 879 aaPredicted RBP10.61□□□□□ -0.71
SMG6-210ENST00000572205 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
SMG6-210ENST00000572205 RBBP6Q7Z6E9 1792 aaKnown RBP10.61□□□□□ -0.71
SMG6-210ENST00000572205 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
SMG6-210ENST00000572205 SPDYE5A6NIY4 337 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 ZBTB48P10074 688 aaPredicted RBP10.6□□□□□ -0.71
SMG6-210ENST00000572205 PDE6AP16499 860 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 TM4SF4P48230 202 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 TNNI2P48788 182 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 CAP1Q01518 475 aa10.6□□□□□ -0.71
SMG6-210ENST00000572205 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
SMG6-210ENST00000572205 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms