RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MIGA2Q7L4E1 593 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 MAPKAPK5Q8IW41 473 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 TEX11Q8IYF3 940 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 LCORLQ8N3X6 602 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 KBTBD3Q8NAB2 608 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 TGFBRAP1Q8WUH2 860 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 SEC62Q99442 399 aaKnown RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 PUS7LQ9H0K6 701 aaKnown RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 ANGEL1Q9UNK9 670 aaKnown RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 NAV1Q8NEY1 1877 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 BAZ2AQ9UIF9 1905 aaKnown RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 M0R2C6 588 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 FOXN1O15353 648 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 ENTPD3O75355 529 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 GLRX3O76003 335 aaKnown RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 GJA5P36382 358 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 TNNI2P48788 182 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 GRM1Q13255 1194 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 TTLL12Q14166 644 aaPredicted RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 MAP3K11Q16584 847 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 SLC4A8Q2Y0W8 1093 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 LDLRAD1Q5T700 205 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 RASAL3Q86YV0 1011 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 C2orf69Q8N8R5 385 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 OSBP2Q969R2 916 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 CAPNS2Q96L46 248 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 ARMT1Q9H993 441 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 FLT1P17948 1338 aa8.47□□□□□ -1.05
SMG6-209ENST00000571442 WDR33Q9C0J8 1336 aaKnown RBP8.47□□□□□ -1.05
SMG6-209ENST00000571442 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 ERC2O15083 957 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 MBD4O95243 580 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 SLC10A3P09131 477 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 GSPT1P15170 499 aaKnown RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 INPP5BP32019 993 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 UBE3CQ15386 1083 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 SHROOM1Q2M3G4 852 aaPredicted RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 RGMBQ6NW40 437 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-209ENST00000571442 SDR42E1Q8WUS8 393 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 GPATCH3Q96I76 525 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 DNAJC18Q9H819 358 aa8.46□□□□□ -1.06
SMG6-209ENST00000571442 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 SAP30BPQ9UHR5 308 aaKnown RBP8.46□□□□□ -1.06
SMG6-209ENST00000571442 LAMB1P07942 1786 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 COL2A1P02458 1487 aaPredicted RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 PHF20L1A8MW92 1017 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 FOXP2O15409 715 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 RNF113AO15541 343 aaKnown RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 IGSF3O75054 1194 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 NPM3O75607 178 aaKnown RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 BAG3O95817 575 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 CYP2D6P10635 497 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 NF2P35240 595 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 ZNF157P51786 506 aaPredicted RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 FKBP1BP68106 108 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 JAG1P78504 1218 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 VGLL4Q14135 290 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 SUPT20HL1Q3ZLR7 823 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 CCDC129Q6ZRS4 1044 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 ZKSCAN4Q969J2 545 aaPredicted RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 HHIPL1Q96JK4 782 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 CSRNP1Q96S65 589 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 ZBTB47Q9UFB7 747 aaPredicted RBP8.45□□□□□ -1.06
SMG6-209ENST00000571442 ZNF112Q9UJU3 913 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 ATAD5Q96QE3 1844 aa8.45□□□□□ -1.06
SMG6-209ENST00000571442 CYP2D7A0A087X1C5 515 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 PLCD1P51178 756 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 ZMYM1Q5SVZ6 1142 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 CCDC84Q86UT8 332 aaPredicted RBP8.44□□□□□ -1.06
SMG6-209ENST00000571442 ZSCAN29Q8IWY8 852 aaPredicted RBP8.44□□□□□ -1.06
SMG6-209ENST00000571442 APPBP2Q92624 585 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 FAM227BQ96M60 508 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 WRNIP1Q96S55 665 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 STRBPQ96SI9 672 aaKnown RBP8.44□□□□□ -1.06
SMG6-209ENST00000571442 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMG6-209ENST00000571442 IL25Q9H293 177 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
SMG6-209ENST00000571442 EPB41L4AQ9HCS5 686 aaPredicted RBP8.44□□□□□ -1.06
SMG6-209ENST00000571442 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
SMG6-209ENST00000571442 PRDM10Q9NQV6 1147 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms