RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 IL27Q8NEV9 243 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 LINS1Q8NG48 757 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 PSMD1Q99460 953 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 SRCIN1Q9C0H9 1055 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 HMX1Q9NP08 348 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-219ENST00000569882 PTPRCP08575 1304 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 ANKRD18BA2A2Z9 1011 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 DDNO94850 711 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 UFL1O94874 794 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 ZIC2O95409 532 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 IGHA1P01876 353 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 FSHRP23945 695 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 GSK3AP49840 483 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 RPS8P62241 208 aaKnown RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 NR5A1Q13285 461 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 IFIT5Q13325 482 aaKnown RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 GCKRQ14397 625 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 SF3B3Q15393 1217 aaKnown RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 WASHC4Q2M389 1173 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 CCDC57Q2TAC2 916 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 SP8Q8IXZ3 490 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 PSMG3-AS1Q96PY0 264 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 PURBQ96QR8 312 aaKnown RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 ZC3H12CQ9C0D7 883 aaKnown RBP6.06□□□□□ -1.44
CNOT1-219ENST00000569882 GGA1Q9UJY5 639 aa6.06□□□□□ -1.44
CNOT1-219ENST00000569882 KIF16BQ96L93 1317 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 CDHR2Q9BYE9 1310 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-219ENST00000569882 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 TNIP1Q15025 636 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 MRPL14Q6P1L8 145 aaKnown RBP6.05□□□□□ -1.44
CNOT1-219ENST00000569882 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-219ENST00000569882 GPC2Q8N158 579 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 FRAT1Q92837 279 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-219ENST00000569882 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
CNOT1-219ENST00000569882 OCSTAMPQ9BR26 566 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 SEC31BQ9NQW1 1179 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 CNNM1Q9NRU3 951 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 FKBPLQ9UIM3 349 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 HACL1Q9UJ83 578 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 HDAC5Q9UQL6 1122 aa6.05□□□□□ -1.44
CNOT1-219ENST00000569882 SCN4AP35499 1836 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 XDHP47989 1333 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ZNF541Q9H0D2 1346 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 GRM8O00222 908 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 IPO8O15397 1037 aaKnown RBP6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ALDH1L1O75891 902 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 IGKV5-2P06315 115 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 USP17L8P0C7I0 530 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 HSPA6P17066 643 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ITGA6P23229 1130 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 RFC5P40937 340 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 GPSM2P81274 684 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 FSTL1Q12841 308 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ALDH1L2Q3SY69 923 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 CIAPIN1Q6FI81 312 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 PNMA8AQ86V59 439 aaPredicted RBP6.04□□□□□ -1.44
CNOT1-219ENST00000569882 FTSJ3Q8IY81 847 aaKnown RBP6.04□□□□□ -1.44
CNOT1-219ENST00000569882 TRMT44Q8IYL2 757 aaKnown RBP6.04□□□□□ -1.44
CNOT1-219ENST00000569882 C7orf43Q8WVR3 580 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ARHGAP9Q9BRR9 750 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 API5Q9BZZ5 524 aaKnown RBP6.04□□□□□ -1.44
CNOT1-219ENST00000569882 VPS33BQ9H267 617 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 GREM2Q9H772 168 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 DBNDD1Q9H9R9 158 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
CNOT1-219ENST00000569882 ZNF521Q96K83 1311 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 WDR90Q96KV7 1748 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 H7C1D1 291 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 PLIN1O60240 522 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 ECE2O60344 883 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 RAD17O75943 681 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 UBTFL1P0CB47 393 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-219ENST00000569882 ATP2B4P23634 1241 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 EPHX2P34913 555 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 CCT4P50991 539 aaKnown RBP6.03□□□□□ -1.44
CNOT1-219ENST00000569882 BRPF1P55201 1214 aaPredicted RBP6.03□□□□□ -1.44
CNOT1-219ENST00000569882 KIAA2012Q0VF49 1180 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 C6orf118Q5T5N4 469 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 PDXDC2PQ6P474 469 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 VPS37DQ86XT2 251 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 TTLL11Q8NHH1 800 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 SSH1Q8WYL5 1049 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 GPKOWQ92917 476 aaPredicted RBP eCLIP6.03□□□□□ -1.44
CNOT1-219ENST00000569882 ANKRD2Q9GZV1 360 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 MAP4K5Q9Y4K4 846 aa6.03□□□□□ -1.44
CNOT1-219ENST00000569882 LRRC37AA6NMS7 1700 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 H7C1W4 665 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 FZD9O00144 591 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 FRAT2O75474 233 aaPredicted RBP6.02□□□□□ -1.45
CNOT1-219ENST00000569882 PRELPP51888 382 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 BEND3Q5T5X7 828 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 LMBR1LQ6UX01 489 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 LDHAL6AQ6ZMR3 332 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 LDHDQ86WU2 507 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 TBC1D16Q8TBP0 767 aa6.02□□□□□ -1.45
CNOT1-219ENST00000569882 GPR101Q96P66 508 aaPredicted RBP6.02□□□□□ -1.45
CNOT1-219ENST00000569882 TAF1DQ9H5J8 278 aaPredicted RBP6.02□□□□□ -1.45
CNOT1-219ENST00000569882 BSDC1Q9NW68 430 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms