RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PCP11498 1178 aaKnown RBP26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 MCTP1Q6DN14 999 aa26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 SGMS1Q86VZ5 419 aa26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 CHAMP1Q96JM3 812 aa26.5■■□□□ 1.83
VCPKMT-205ENST00000569518 GOLGA8BA8MQT2 603 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 TRAK2O60296 914 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 F13A1P00488 732 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 LIFRP42702 1097 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 DOK7Q18PE1 504 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 ARPP21Q9UBL0 812 aaPredicted RBP26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 DDX60LQ5H9U9 1706 aaKnown RBP26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 CC2D2BQ6DHV5 1058 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 CERS5Q8N5B7 392 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 SENP2Q9HC62 589 aa26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 NAP1L2Q9ULW6 460 aaPredicted RBP26.49■■□□□ 1.83
VCPKMT-205ENST00000569518 TMEM67Q5HYA8 995 aa26.48■■□□□ 1.83
VCPKMT-205ENST00000569518 NOL10Q9BSC4 688 aaKnown RBP26.48■■□□□ 1.83
VCPKMT-205ENST00000569518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.48■■□□□ 1.83
VCPKMT-205ENST00000569518 PTPDC1A2A3K4 754 aa26.47■■□□□ 1.83
VCPKMT-205ENST00000569518 BTDP43251 543 aa26.47■■□□□ 1.83
VCPKMT-205ENST00000569518 HMGN5P82970 282 aaKnown RBP26.47■■□□□ 1.83
VCPKMT-205ENST00000569518 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
VCPKMT-205ENST00000569518 SLF2Q8IX21 1173 aa26.47■■□□□ 1.83
VCPKMT-205ENST00000569518 APOA5Q6Q788 366 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 PODNQ7Z5L7 613 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 SCN9AQ15858 1988 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 FOCADQ5VW36 1801 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 IFIT3O14879 490 aaKnown RBP26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 EVX2Q03828 476 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 STK11IPQ8N1F8 1099 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 ESR2Q92731 530 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 TOMM22Q9NS69 142 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 LMBRD1Q9NUN5 540 aa26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 ZNF219Q9P2Y4 722 aaPredicted RBP26.46■■□□□ 1.83
VCPKMT-205ENST00000569518 ORC4O43929 436 aa26.45■■□□□ 1.82
VCPKMT-205ENST00000569518 DDX11Q96FC9 970 aa26.45■■□□□ 1.82
VCPKMT-205ENST00000569518 VPS37CA5D8V6 355 aaPredicted RBP26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 CYP2D6P10635 497 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 KCNA3P22001 575 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 CDC37L1Q7L3B6 337 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 MCM9Q9NXL9 1143 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 NID2Q14112 1375 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 ROBO3Q96MS0 1386 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 DHX16O60231 1041 aaKnown RBP26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 PLCG2P16885 1265 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 USP5P45974 858 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 RHBDL3P58872 404 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 SKOR2Q2VWA4 1001 aaPredicted RBP26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 DBNDD1Q9H9R9 158 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 DAGLAQ9Y4D2 1042 aa26.44■■□□□ 1.82
VCPKMT-205ENST00000569518 TCHHQ07283 1943 aa26.43■■□□□ 1.82
VCPKMT-205ENST00000569518 USP17L8P0C7I0 530 aa26.43■■□□□ 1.82
VCPKMT-205ENST00000569518 SART3Q15020 963 aaKnown RBP26.43■■□□□ 1.82
VCPKMT-205ENST00000569518 C12orf60Q5U649 245 aa26.43■■□□□ 1.82
VCPKMT-205ENST00000569518 TTLL6Q8N841 843 aa26.43■■□□□ 1.82
VCPKMT-205ENST00000569518 G3V3G9 751 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 DCAF8Q5TAQ9 597 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 FBXW7Q969H0 707 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 ATP6V1DQ9Y5K8 247 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 DPEP1P16444 411 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 KIAA2012Q0VF49 1180 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 SEC23AQ15436 765 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 GRIPAP1Q4V328 841 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 RAB11FIP4Q86YS3 637 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 TGFBRAP1Q8WUH2 860 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 ZKSCAN3Q9BRR0 538 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 MXD3Q9BW11 206 aa26.42■■□□□ 1.82
VCPKMT-205ENST00000569518 C21orf2O43822 256 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 ECE2O60344 883 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 SLC3A2P08195 630 aaKnown RBP26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 FDPSP14324 419 aaKnown RBP26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 NFXL1Q6ZNB6 911 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 FAM184AQ8NB25 1140 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 SUPT20HQ8NEM7 779 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 ADAMTSL1Q8N6G6 1762 aa26.41■■□□□ 1.82
VCPKMT-205ENST00000569518 ZBTB43O43298 467 aa26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 ZBTB7AO95365 584 aa26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 METAP2P50579 478 aaKnown RBP eCLIP26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 FKBP1AP62942 108 aaKnown RBP26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 WTAPQ15007 396 aa26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 UBAC1Q9BSL1 405 aa26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 KCNQ5Q9NR82 932 aa26.4■■□□□ 1.82
VCPKMT-205ENST00000569518 PRDM1O75626 825 aa26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 STRIP1Q5VSL9 837 aa26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 TEX11Q8IYF3 940 aa26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 TMTC2Q8N394 836 aa26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 TTF2Q9UNY4 1162 aaKnown RBP26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 SLC12A7Q9Y666 1083 aa26.39■■□□□ 1.82
VCPKMT-205ENST00000569518 ERICH2A1L162 156 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 CCDC69A6NI79 296 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 PRPF40AO75400 957 aaKnown RBP26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 AOC3Q16853 763 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 MICU3Q86XE3 530 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 MTFR1LQ9H019 292 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 TNKSO95271 1327 aa26.39■■□□□ 1.81
VCPKMT-205ENST00000569518 RCAN1P53805 252 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 FOXD4L6Q3SYB3 417 aaPredicted RBP26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 DACT2Q5SW24 774 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms