RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 MLLT1Q03111 559 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 MAP3K11Q16584 847 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 SLITRK4Q8IW52 837 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 TTC9Q92623 222 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 MDFIQ99750 246 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 MUC3BQ9H195 1237 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 OSBPL2Q9H1P3 480 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 SLC6A14Q9UN76 642 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 TLR6Q9Y2C9 796 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 EFR3BQ9Y2G0 817 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 FAM135AQ9P2D6 1515 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 NME2P22392 152 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 ADH6P28332 368 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 APOBRQ0VD83 1088 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 PLD4Q96BZ4 506 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 GMPR2Q9P2T1 348 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-214ENST00000568651 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 CDC42BPAQ5VT25 1732 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 PZPP20742 1482 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 PLEKHH2Q8IVE3 1493 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 C2CD2LO14523 706 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 LRRC14Q15048 493 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 VWA5B2Q8N398 1253 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 MICALL1Q8N3F8 863 aa9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 INO80Q9ULG1 1556 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-214ENST00000568651 CDC14CA4D256 554 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 F6X3S4 739 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 PAGE1O75459 146 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 MAP2K3P46734 347 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 FAM160A1Q05DH4 1040 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 VN1R5Q7Z5H4 357 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 MKL1Q969V6 931 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 EMILIN2Q9BXX0 1053 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 MIR1-1HGQ9H1L0 117 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 IGFLR1Q9H665 355 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 UGGT1Q9NYU2 1555 aa9.36□□□□□ -0.91
HERPUD1-214ENST00000568651 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 GPR25O00155 361 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 SNRPBP14678 240 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 MX2P20592 715 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 LMNB1P20700 586 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 ADH7P40394 386 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 SERINC3Q13530 473 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 MPP2Q14168 576 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 PERM1Q5SV97 790 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 NKD1Q969G9 470 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 ZNF408Q9H9D4 720 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 MTUS2Q5JR59 1369 aa9.35□□□□□ -0.91
HERPUD1-214ENST00000568651 MED14O60244 1454 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 CPB1P15086 417 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 BMP6P22004 513 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 LTKP29376 864 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 ELMSAN1Q6PJG2 1045 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 SOX17Q9H6I2 414 aaPredicted RBP9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 NAGPAQ9UK23 515 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
HERPUD1-214ENST00000568651 KDM5DQ9BY66 1539 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 TLDC2A0PJX2 215 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 FAM221AA4D161 298 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 CRKP46108 304 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 ZNF423Q2M1K9 1284 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 SULF2Q8IWU5 870 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 REXO1Q8N1G1 1221 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 LPIN3Q9BQK8 851 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 POLR1AO95602 1720 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
HERPUD1-214ENST00000568651 RNF17Q9BXT8 1623 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 CILPO75339 1184 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 ESRRAP11474 423 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 ARNTP27540 789 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 CABP4P57796 275 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 AP3B2Q13367 1082 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 CWF19L2Q2TBE0 894 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 SRRTQ9BXP5 876 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-214ENST00000568651 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms