RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
HACD3-208ENST00000566239 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
HACD3-208ENST00000566239 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
HACD3-208ENST00000566239 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
HACD3-208ENST00000566239 PICALMQ13492 652 aa16.43■□□□□ 0.22
HACD3-208ENST00000566239 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
HACD3-208ENST00000566239 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
HACD3-208ENST00000566239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.43■□□□□ 0.22
HACD3-208ENST00000566239 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
HACD3-208ENST00000566239 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
HACD3-208ENST00000566239 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
HACD3-208ENST00000566239 ARMC5Q96C12 935 aa16.42■□□□□ 0.22
HACD3-208ENST00000566239 GPR108Q9NPR9 543 aa16.42■□□□□ 0.22
HACD3-208ENST00000566239 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
HACD3-208ENST00000566239 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 PDHXO00330 501 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 GNRH1P01148 92 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
HACD3-208ENST00000566239 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 POLA2Q14181 598 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
HACD3-208ENST00000566239 LRP2BPQ9P2M1 347 aa16.41■□□□□ 0.22
HACD3-208ENST00000566239 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
HACD3-208ENST00000566239 PHF20L1A8MW92 1017 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 CXCL11O14625 94 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
HACD3-208ENST00000566239 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
HACD3-208ENST00000566239 MCAMP43121 646 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 CAP1Q01518 475 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 SH3BP5LQ7L8J4 393 aa16.4■□□□□ 0.22
HACD3-208ENST00000566239 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
HACD3-208ENST00000566239 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
HACD3-208ENST00000566239 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
HACD3-208ENST00000566239 PRMT2P55345 433 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 RHBDL3P58872 404 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 MAP3K10Q02779 954 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 PRPF38BQ5VTL8 546 aaKnown RBP16.39■□□□□ 0.21
HACD3-208ENST00000566239 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
HACD3-208ENST00000566239 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
HACD3-208ENST00000566239 COL2A1P02458 1487 aaPredicted RBP16.39■□□□□ 0.21
HACD3-208ENST00000566239 PTPRAP18433 802 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 FASTKD5Q7L8L6 764 aaKnown RBP16.38■□□□□ 0.21
HACD3-208ENST00000566239 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 ZHX2Q9Y6X8 837 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 MYH1P12882 1939 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
HACD3-208ENST00000566239 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
HACD3-208ENST00000566239 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 POTEFA5A3E0 1075 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
HACD3-208ENST00000566239 TBC1D12O60347 775 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 BAG3O95817 575 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 MOGSQ13724 837 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
HACD3-208ENST00000566239 SIPA1L1O43166 1804 aa16.37■□□□□ 0.21
HACD3-208ENST00000566239 A0A0G2JLL6 359 aaPredicted RBP16.36■□□□□ 0.21
HACD3-208ENST00000566239 IGSF3O75054 1194 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 PLCG2P16885 1265 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 HOXD10P28358 340 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
HACD3-208ENST00000566239 PRRT2Q7Z6L0 340 aaPredicted RBP16.36■□□□□ 0.21
HACD3-208ENST00000566239 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 OSBPL5Q9H0X9 879 aaPredicted RBP16.36■□□□□ 0.21
HACD3-208ENST00000566239 SNRKQ9NRH2 765 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
HACD3-208ENST00000566239 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 ADGRA2Q96PE1 1338 aa16.36■□□□□ 0.21
HACD3-208ENST00000566239 HTTP42858 3142 aa16.35■□□□□ 0.21
HACD3-208ENST00000566239 RLBP1P12271 317 aa16.35■□□□□ 0.21
HACD3-208ENST00000566239 PSMC4P43686 418 aa16.35■□□□□ 0.21
HACD3-208ENST00000566239 GADL1Q6ZQY3 521 aa16.35■□□□□ 0.21
HACD3-208ENST00000566239 ZNF512BQ96KM6 892 aaPredicted RBP16.35■□□□□ 0.21
HACD3-208ENST00000566239 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
HACD3-208ENST00000566239 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
HACD3-208ENST00000566239 SLC34A2O95436 690 aa16.34■□□□□ 0.21
HACD3-208ENST00000566239 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
HACD3-208ENST00000566239 MS4A1P11836 297 aa16.34■□□□□ 0.21
HACD3-208ENST00000566239 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
HACD3-208ENST00000566239 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
HACD3-208ENST00000566239 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
HACD3-208ENST00000566239 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 CYP2E1P05181 493 aaPredicted RBP16.33■□□□□ 0.2
HACD3-208ENST00000566239 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms