RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
CPNE2-206ENST00000566042 TPM2P07951 284 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 PDIA4P13667 645 aaKnown RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 WTAPQ15007 396 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 ZNF396Q96N95 335 aaPredicted RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 PCDHA7Q9UN72 937 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 RTL9Q8NET4 1388 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 ZNF804BA4D1E1 1349 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 NMT2O60551 498 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 CYP2D6P10635 497 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 KRT40Q6A162 431 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 UBAC1Q9BSL1 405 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 UTRNP46939 3433 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 ERICH2A1L162 156 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 USP17L21D6R901 530 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 SYNE3Q6ZMZ3 975 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 CCDC73Q6ZRK6 1079 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 CLSTN2Q9H4D0 955 aa11.93□□□□□ -0.5
CPNE2-206ENST00000566042 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
CPNE2-206ENST00000566042 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 FAM47AQ5JRC9 791 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 SASS6Q6UVJ0 657 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 C17orf53Q8N3J3 647 aaPredicted RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 TMEM87BQ96K49 555 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 TM4SF1P30408 202 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 GRIK5Q16478 980 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 BTAF1O14981 1849 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
CPNE2-206ENST00000566042 KRT23Q9C075 422 aa11.92□□□□□ -0.5
CPNE2-206ENST00000566042 TNKSO95271 1327 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
CPNE2-206ENST00000566042 GNAT2P19087 354 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 ALX1Q15699 326 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 SPECC1Q5M775 1068 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 NSUN4Q96CB9 384 aaKnown RBP11.91□□□□□ -0.5
CPNE2-206ENST00000566042 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 KINO60870 393 aaKnown RBP11.91□□□□□ -0.5
CPNE2-206ENST00000566042 NDUFA8P51970 172 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
CPNE2-206ENST00000566042 NTRK3Q16288 839 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 DZIP1Q86YF9 867 aaKnown RBP11.91□□□□□ -0.5
CPNE2-206ENST00000566042 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 BIN1O00499 593 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 RTN1Q16799 776 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 FBXO33Q7Z6M2 555 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 CNNM2Q9H8M5 875 aa11.91□□□□□ -0.5
CPNE2-206ENST00000566042 SNW1Q13573 536 aaKnown RBP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 TRIM29Q14134 588 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 PRR5LQ6MZQ0 368 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 SDF4Q9BRK5 362 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 BTBD18B2RXH4 712 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 SPTLC2O15270 562 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 ZNF165P49910 485 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 C11orf57Q6ZUT1 292 aaPredicted RBP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
CPNE2-206ENST00000566042 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
CPNE2-206ENST00000566042 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.51
CPNE2-206ENST00000566042 CDKL5O76039 1030 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 NR5A1Q13285 461 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 SGMS1Q86VZ5 419 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 ESR2Q92731 530 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
CPNE2-206ENST00000566042 RREB1Q92766 1687 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
CPNE2-206ENST00000566042 ANO1Q5XXA6 986 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
CPNE2-206ENST00000566042 MRPS27Q92552 414 aaKnown RBP11.89□□□□□ -0.51
CPNE2-206ENST00000566042 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
CPNE2-206ENST00000566042 NOL7Q9UMY1 257 aaKnown RBP11.89□□□□□ -0.51
CPNE2-206ENST00000566042 LIFRP42702 1097 aa11.88□□□□□ -0.51
CPNE2-206ENST00000566042 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
CPNE2-206ENST00000566042 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms