RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PTPRFP10586 1907 aa29.32■■■□□ 2.28
RAB40C-209ENST00000565511 DOCK1Q14185 1865 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 ENTPD3O75355 529 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 ERICH6Q7L0X2 663 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 ARHGAP39Q9C0H5 1083 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 KCNH4Q9UQ05 1017 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 MAST2Q6P0Q8 1798 aa29.31■■■□□ 2.28
RAB40C-209ENST00000565511 RBBP6Q7Z6E9 1792 aaKnown RBP29.31■■■□□ 2.28
RAB40C-209ENST00000565511 KIAA0100Q14667 2235 aaKnown RBP29.3■■■□□ 2.28
RAB40C-209ENST00000565511 ATP8B2P98198 1209 aa29.3■■■□□ 2.28
RAB40C-209ENST00000565511 PICALMQ13492 652 aa29.3■■■□□ 2.28
RAB40C-209ENST00000565511 SPTY2D1Q68D10 685 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-209ENST00000565511 GPR75-ASB3A0A0A6YYF3 556 aa29.29■■■□□ 2.28
RAB40C-209ENST00000565511 GORABQ5T7V8 394 aa29.29■■■□□ 2.28
RAB40C-209ENST00000565511 ITPRIPQ8IWB1 547 aa29.29■■■□□ 2.28
RAB40C-209ENST00000565511 NSUN4Q96CB9 384 aaKnown RBP29.29■■■□□ 2.28
RAB40C-209ENST00000565511 DBNDD2Q9BQY9 259 aa29.29■■■□□ 2.28
RAB40C-209ENST00000565511 ZBED9Q6R2W3 1325 aa29.28■■■□□ 2.28
RAB40C-209ENST00000565511 CDK5RAP2Q96SN8 1893 aa29.28■■■□□ 2.28
RAB40C-209ENST00000565511 TLR2O60603 784 aa29.28■■■□□ 2.28
RAB40C-209ENST00000565511 TNNI3KQ59H18 835 aa29.28■■■□□ 2.28
RAB40C-209ENST00000565511 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.28■■■□□ 2.28
RAB40C-209ENST00000565511 FPGT-TNNI3KV9GXZ4 949 aa29.28■■■□□ 2.28
RAB40C-209ENST00000565511 SIPA1L1O43166 1804 aa29.27■■■□□ 2.28
RAB40C-209ENST00000565511 ADGRA2Q96PE1 1338 aa29.27■■■□□ 2.28
RAB40C-209ENST00000565511 POTEFA5A3E0 1075 aa29.27■■■□□ 2.28
RAB40C-209ENST00000565511 ZBTB7BO15156 539 aaPredicted RBP29.27■■■□□ 2.28
RAB40C-209ENST00000565511 FTSJ3Q8IY81 847 aaKnown RBP29.27■■■□□ 2.28
RAB40C-209ENST00000565511 ZCCHC17Q9NP64 241 aaKnown RBP29.27■■■□□ 2.28
RAB40C-209ENST00000565511 SNRKQ9NRH2 765 aa29.27■■■□□ 2.28
RAB40C-209ENST00000565511 MAP3K10Q02779 954 aa29.26■■■□□ 2.27
RAB40C-209ENST00000565511 ZSCAN29Q8IWY8 852 aaPredicted RBP29.26■■■□□ 2.27
RAB40C-209ENST00000565511 SLF2Q8IX21 1173 aa29.26■■■□□ 2.27
RAB40C-209ENST00000565511 CTGFP29279 349 aa29.25■■■□□ 2.27
RAB40C-209ENST00000565511 TLR7Q9NYK1 1049 aaKnown RBP29.25■■■□□ 2.27
RAB40C-209ENST00000565511 PTCH2Q9Y6C5 1203 aa29.25■■■□□ 2.27
RAB40C-209ENST00000565511 BRCA2P51587 3418 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 FAM196BA6NMK8 535 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 ECM2O94769 699 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-209ENST00000565511 ANKRD23Q86SG2 305 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 CCDC84Q86UT8 332 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-209ENST00000565511 SCYL3Q8IZE3 742 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 ARMC5Q96C12 935 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 GPR108Q9NPR9 543 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 RAI14Q9P0K7 980 aa29.24■■■□□ 2.27
RAB40C-209ENST00000565511 ATAD5Q96QE3 1844 aa29.23■■■□□ 2.27
RAB40C-209ENST00000565511 PDHXO00330 501 aa29.23■■■□□ 2.27
RAB40C-209ENST00000565511 SURF6O75683 361 aaKnown RBP29.23■■■□□ 2.27
RAB40C-209ENST00000565511 GPAT2Q6NUI2 795 aa29.23■■■□□ 2.27
RAB40C-209ENST00000565511 PANK1Q8TE04 598 aa29.23■■■□□ 2.27
RAB40C-209ENST00000565511 CPA4Q9UI42 421 aa29.23■■■□□ 2.27
RAB40C-209ENST00000565511 UQCRFS1P1P0C7P4 283 aa29.22■■■□□ 2.27
RAB40C-209ENST00000565511 PTPRAP18433 802 aa29.22■■■□□ 2.27
RAB40C-209ENST00000565511 LACTBP83111 547 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-209ENST00000565511 OS9Q13438 667 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-209ENST00000565511 C17orf99Q6UX52 265 aa29.22■■■□□ 2.27
RAB40C-209ENST00000565511 NOP58Q9Y2X3 529 aaKnown RBP29.22■■■□□ 2.27
RAB40C-209ENST00000565511 DBNLQ9UJU6 430 aaKnown RBP29.21■■■□□ 2.27
RAB40C-209ENST00000565511 FOCADQ5VW36 1801 aa29.21■■■□□ 2.27
RAB40C-209ENST00000565511 TTC39AQ5SRH9 613 aa29.2■■■□□ 2.26
RAB40C-209ENST00000565511 CEP85Q6P2H3 762 aa29.2■■■□□ 2.26
RAB40C-209ENST00000565511 ADGRA1Q86SQ6 560 aa29.2■■■□□ 2.26
RAB40C-209ENST00000565511 SH3RF3Q8TEJ3 882 aaPredicted RBP29.2■■■□□ 2.26
RAB40C-209ENST00000565511 ZHX2Q9Y6X8 837 aa29.2■■■□□ 2.26
RAB40C-209ENST00000565511 COL2A1P02458 1487 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-209ENST00000565511 CYP2E1P05181 493 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-209ENST00000565511 GSTO1P78417 241 aa29.19■■■□□ 2.26
RAB40C-209ENST00000565511 LRP2BPQ9P2M1 347 aa29.19■■■□□ 2.26
RAB40C-209ENST00000565511 AFG3L2Q9Y4W6 797 aa29.19■■■□□ 2.26
RAB40C-209ENST00000565511 MKI67P46013 3256 aaKnown RBP29.18■■■□□ 2.26
RAB40C-209ENST00000565511 CXCL11O14625 94 aa29.18■■■□□ 2.26
RAB40C-209ENST00000565511 NPM3O75607 178 aaKnown RBP29.18■■■□□ 2.26
RAB40C-209ENST00000565511 RRP1BQ14684 758 aaKnown RBP29.18■■■□□ 2.26
RAB40C-209ENST00000565511 ZNF333Q96JL9 665 aa29.18■■■□□ 2.26
RAB40C-209ENST00000565511 OSBPL5Q9H0X9 879 aaPredicted RBP29.18■■■□□ 2.26
RAB40C-209ENST00000565511 PIH1D3Q9NQM4 214 aaKnown RBP29.18■■■□□ 2.26
RAB40C-209ENST00000565511 PICK1Q9NRD5 415 aa29.18■■■□□ 2.26
RAB40C-209ENST00000565511 MGAMO43451 1857 aa29.18■■■□□ 2.26
RAB40C-209ENST00000565511 A0A0G2JLL6 359 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-209ENST00000565511 LDHCP07864 332 aa29.17■■■□□ 2.26
RAB40C-209ENST00000565511 CYP2C8P10632 490 aa29.17■■■□□ 2.26
RAB40C-209ENST00000565511 ZAP70P43403 619 aa29.17■■■□□ 2.26
RAB40C-209ENST00000565511 PRRT2Q7Z6L0 340 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-209ENST00000565511 TEX11Q8IYF3 940 aa29.17■■■□□ 2.26
RAB40C-209ENST00000565511 EAF2Q96CJ1 260 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-209ENST00000565511 CCDC8Q9H0W5 538 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-209ENST00000565511 TRIM47Q96LD4 638 aa29.16■■■□□ 2.26
RAB40C-209ENST00000565511 CTNND1O60716 968 aaKnown RBP29.15■■■□□ 2.26
RAB40C-209ENST00000565511 AATFQ9NY61 560 aaKnown RBP eCLIP29.15■■■□□ 2.26
RAB40C-209ENST00000565511 LOC285556D6RIA3 1793 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 TBC1D12O60347 775 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 EN2P19622 333 aaPredicted RBP29.14■■■□□ 2.26
RAB40C-209ENST00000565511 CCDC158Q5M9N0 1113 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 SH3TC2Q8TF17 1288 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 ZNF512BQ96KM6 892 aaPredicted RBP29.14■■■□□ 2.26
RAB40C-209ENST00000565511 EXOC6BQ9Y2D4 811 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 NDUFB9Q9Y6M9 179 aa29.14■■■□□ 2.26
RAB40C-209ENST00000565511 TRIM75PA6NK02 468 aa29.13■■■□□ 2.25
RAB40C-209ENST00000565511 BCRP11274 1271 aa29.13■■■□□ 2.25
RAB40C-209ENST00000565511 SLC9C1Q4G0N8 1177 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms