RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
SMG1-210ENST00000565224 LRP6O75581 1613 aa8.37□□□□□ -1.07
SMG1-210ENST00000565224 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 PDE8BO95263 885 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 SERPINC1P01008 464 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 UBASH3AP57075 661 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 PNOCQ13519 176 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 ALX1Q15699 326 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 CCDC102BQ68D86 513 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 SYT10Q6XYQ8 523 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 STRBPQ96SI9 672 aaKnown RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 UBN2Q6ZU65 1347 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 MYH7P12883 1935 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 TCRBV5S4A2TA0A5A2 114 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 KIF20AO95235 890 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 LIFRP42702 1097 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 PHKA1P46020 1223 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 GABPB1Q06547 395 aaPredicted RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 HLFQ16534 295 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 FBXO38Q6PIJ6 1188 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 KRBA2Q6ZNG9 492 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 CNNM3Q8NE01 707 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 WASF1Q92558 559 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 CLIC6Q96NY7 704 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
SMG1-210ENST00000565224 TAOK2Q9UL54 1235 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 KCNH3Q9ULD8 1083 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 ASAP1Q9ULH1 1129 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
SMG1-210ENST00000565224 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 CFAP100Q494V2 611 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 LONRF3Q496Y0 759 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 VSTM4Q8IW00 320 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 KRT222Q8N1A0 295 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 PIGBQ92521 554 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 DPF2Q92785 391 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 AKAP11Q9UKA4 1901 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 TOGARAM1Q9Y4F4 1720 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 PHLPP2Q6ZVD8 1323 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 PATL2C9JE40 543 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 ETF1P62495 437 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 NOSTRINQ8IVI9 506 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 LPIN2Q92539 896 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 MYL10Q9BUA6 226 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 NAPBQ9H115 298 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 TMX1Q9H3N1 280 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 CNNM2Q9H8M5 875 aa8.35□□□□□ -1.07
SMG1-210ENST00000565224 EPB41L4AQ9HCS5 686 aaPredicted RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 TRMT112Q9UI30 125 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
SMG1-210ENST00000565224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG1-210ENST00000565224 NID2Q14112 1375 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 PDE8AO60658 829 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 IFNAR1P17181 557 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 EVA1CP58658 441 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG1-210ENST00000565224 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 KRT23Q9C075 422 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 FANCLQ9NW38 375 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 RGS17Q9UGC6 210 aaPredicted RBP8.34□□□□□ -1.07
SMG1-210ENST00000565224 PCDHA5Q9Y5H7 936 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 MROH5Q6ZUA9 1318 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 UBE2Q2LH0YL09 131 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 MBD4O95243 580 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 MMP1P03956 469 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 FGFR2P21802 821 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 MAP3K12Q12852 859 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 FOXP4Q8IVH2 680 aaPredicted RBP8.34□□□□□ -1.07
SMG1-210ENST00000565224 STK11IPQ8N1F8 1099 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 SYTL4Q96C24 671 aaPredicted RBP8.34□□□□□ -1.07
SMG1-210ENST00000565224 INCENPQ9NQS7 918 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 FAM53CQ9NYF3 392 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
SMG1-210ENST00000565224 TMEM232C9JQI7 657 aa8.33□□□□□ -1.08
SMG1-210ENST00000565224 H2AFXP16104 143 aaPredicted RBP8.33□□□□□ -1.08
SMG1-210ENST00000565224 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
SMG1-210ENST00000565224 RTN1Q16799 776 aa8.33□□□□□ -1.08
SMG1-210ENST00000565224 ERCC6LQ2NKX8 1250 aa8.33□□□□□ -1.08
SMG1-210ENST00000565224 RILPL1Q5EBL4 403 aa8.33□□□□□ -1.08
SMG1-210ENST00000565224 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
SMG1-210ENST00000565224 DIS3L2Q8IYB7 885 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms