RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 ZNF333Q96JL9 665 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 ARHGAP39Q9C0H5 1083 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
CLN6-204ENST00000564752 HMG20BQ9P0W2 317 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 BRCA2P51587 3418 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 GPR75-ASB3A0A0A6YYF3 556 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 CXCL11O14625 94 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 NBPF11Q86T75 865 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 SPATA5Q8NB90 893 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 ZNF384Q8TF68 577 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 MROH7-TTC4A0A0A0MT08 1334 aa22.8■■□□□ 1.24
CLN6-204ENST00000564752 RBBP6Q7Z6E9 1792 aaKnown RBP22.79■■□□□ 1.24
CLN6-204ENST00000564752 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
CLN6-204ENST00000564752 GNRH1P01148 92 aa22.79■■□□□ 1.24
CLN6-204ENST00000564752 ARID4AP29374 1257 aaPredicted RBP22.79■■□□□ 1.24
CLN6-204ENST00000564752 GORABQ5T7V8 394 aa22.79■■□□□ 1.24
CLN6-204ENST00000564752 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
CLN6-204ENST00000564752 ZSCAN29Q8IWY8 852 aaPredicted RBP22.79■■□□□ 1.24
CLN6-204ENST00000564752 RHBDL3P58872 404 aa22.78■■□□□ 1.24
CLN6-204ENST00000564752 SLC9C1Q4G0N8 1177 aa22.78■■□□□ 1.24
CLN6-204ENST00000564752 PI16Q6UXB8 463 aa22.78■■□□□ 1.24
CLN6-204ENST00000564752 SCYL3Q8IZE3 742 aa22.78■■□□□ 1.24
CLN6-204ENST00000564752 NSUN4Q96CB9 384 aaKnown RBP22.78■■□□□ 1.24
CLN6-204ENST00000564752 CPA4Q9UI42 421 aa22.78■■□□□ 1.24
CLN6-204ENST00000564752 KIAA0100Q14667 2235 aaKnown RBP22.78■■□□□ 1.24
CLN6-204ENST00000564752 PTPRAP18433 802 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 EN2P19622 333 aaPredicted RBP22.77■■□□□ 1.24
CLN6-204ENST00000564752 PICALMQ13492 652 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 GPAT2Q6NUI2 795 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 TMEM106CQ9BVX2 250 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 ZHX2Q9Y6X8 837 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 ADGRA2Q96PE1 1338 aa22.77■■□□□ 1.24
CLN6-204ENST00000564752 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
CLN6-204ENST00000564752 LDHCP07864 332 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 SLURP2P0DP57 97 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 RLBP1P12271 317 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 PRMT2P55345 433 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 GSTO1P78417 241 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 POLA2Q14181 598 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 PICK1Q9NRD5 415 aa22.76■■□□□ 1.23
CLN6-204ENST00000564752 AK9Q5TCS8 1911 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 MYH2Q9UKX2 1941 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 CTNND1O60716 968 aaKnown RBP22.75■■□□□ 1.23
CLN6-204ENST00000564752 MAP4K4O95819 1239 aaPredicted RBP22.75■■□□□ 1.23
CLN6-204ENST00000564752 CTGFP29279 349 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 MCAMP43121 646 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 ATP8B2P98198 1209 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 AFG3L2Q9Y4W6 797 aa22.75■■□□□ 1.23
CLN6-204ENST00000564752 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
CLN6-204ENST00000564752 TBC1D12O60347 775 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 UQCRFS1P1P0C7P4 283 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 PSMC4P43686 418 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 FASTKD5Q7L8L6 764 aaKnown RBP22.74■■□□□ 1.23
CLN6-204ENST00000564752 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
CLN6-204ENST00000564752 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 GPR108Q9NPR9 543 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 RAI14Q9P0K7 980 aa22.74■■□□□ 1.23
CLN6-204ENST00000564752 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
CLN6-204ENST00000564752 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
CLN6-204ENST00000564752 PARK7Q99497 189 aaKnown RBP22.73■■□□□ 1.23
CLN6-204ENST00000564752 C1orf115Q9H7X2 142 aa22.73■■□□□ 1.23
CLN6-204ENST00000564752 CYP2C8P10632 490 aa22.72■■□□□ 1.23
CLN6-204ENST00000564752 SH3TC2Q8TF17 1288 aa22.72■■□□□ 1.23
CLN6-204ENST00000564752 LRP2BPQ9P2M1 347 aa22.72■■□□□ 1.23
CLN6-204ENST00000564752 SRRDQ9UH36 339 aa22.72■■□□□ 1.23
CLN6-204ENST00000564752 ECM2O94769 699 aaPredicted RBP22.71■■□□□ 1.23
CLN6-204ENST00000564752 BCRP11274 1271 aa22.71■■□□□ 1.23
CLN6-204ENST00000564752 HOXD10P28358 340 aa22.71■■□□□ 1.23
CLN6-204ENST00000564752 SLC4A8Q2Y0W8 1093 aa22.71■■□□□ 1.23
CLN6-204ENST00000564752 TNNI3KQ59H18 835 aa22.71■■□□□ 1.23
CLN6-204ENST00000564752 FPGT-TNNI3KV9GXZ4 949 aa22.71■■□□□ 1.23
CLN6-204ENST00000564752 FMNL1O95466 1100 aaPredicted RBP22.7■■□□□ 1.22
CLN6-204ENST00000564752 OSBPP22059 807 aa22.7■■□□□ 1.22
CLN6-204ENST00000564752 PANK1Q8TE04 598 aa22.7■■□□□ 1.22
CLN6-204ENST00000564752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
CLN6-204ENST00000564752 SLC45A1Q9Y2W3 748 aa22.7■■□□□ 1.22
CLN6-204ENST00000564752 ZBTB7BO15156 539 aaPredicted RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 SURF6O75683 361 aaKnown RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 MS4A1P11836 297 aa22.69■■□□□ 1.22
CLN6-204ENST00000564752 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 CCDC158Q5M9N0 1113 aa22.69■■□□□ 1.22
CLN6-204ENST00000564752 GADL1Q6ZQY3 521 aa22.69■■□□□ 1.22
CLN6-204ENST00000564752 DBNDD2Q9BQY9 259 aa22.69■■□□□ 1.22
CLN6-204ENST00000564752 OSBPL5Q9H0X9 879 aaPredicted RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 SNRKQ9NRH2 765 aa22.69■■□□□ 1.22
CLN6-204ENST00000564752 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
CLN6-204ENST00000564752 TTC39AQ5SRH9 613 aa22.68■■□□□ 1.22
CLN6-204ENST00000564752 TEX11Q8IYF3 940 aa22.68■■□□□ 1.22
CLN6-204ENST00000564752 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.68■■□□□ 1.22
CLN6-204ENST00000564752 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
CLN6-204ENST00000564752 FAM196BA6NMK8 535 aa22.67■■□□□ 1.22
CLN6-204ENST00000564752 CCDC84Q86UT8 332 aaPredicted RBP22.67■■□□□ 1.22
CLN6-204ENST00000564752 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
CLN6-204ENST00000564752 ZNF512BQ96KM6 892 aaPredicted RBP22.67■■□□□ 1.22
CLN6-204ENST00000564752 RCAN3Q9UKA8 241 aa22.67■■□□□ 1.22
CLN6-204ENST00000564752 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
CLN6-204ENST00000564752 ZSWIM8A7E2V4 1837 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms