RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 KIAA0100Q14667 2235 aaKnown RBP29.49■■■□□ 2.31
NME3-206ENST00000564252 MAP3K10Q02779 954 aa29.48■■■□□ 2.31
NME3-206ENST00000564252 G3BP1Q13283 466 aaKnown RBP eCLIP29.48■■■□□ 2.31
NME3-206ENST00000564252 ZKSCAN2Q63HK3 967 aa29.48■■■□□ 2.31
NME3-206ENST00000564252 C17orf99Q6UX52 265 aa29.48■■■□□ 2.31
NME3-206ENST00000564252 PI16Q6UXB8 463 aa29.48■■■□□ 2.31
NME3-206ENST00000564252 ZNF333Q96JL9 665 aa29.48■■■□□ 2.31
NME3-206ENST00000564252 GPR75-ASB3A0A0A6YYF3 556 aa29.47■■■□□ 2.31
NME3-206ENST00000564252 DDTLA6NHG4 134 aaPredicted RBP29.47■■■□□ 2.31
NME3-206ENST00000564252 PDHXO00330 501 aa29.47■■■□□ 2.31
NME3-206ENST00000564252 ARID4AP29374 1257 aaPredicted RBP29.47■■■□□ 2.31
NME3-206ENST00000564252 SPATA5Q8NB90 893 aa29.47■■■□□ 2.31
NME3-206ENST00000564252 ADGRA2Q96PE1 1338 aa29.46■■■□□ 2.31
NME3-206ENST00000564252 RHBDL3P58872 404 aa29.46■■■□□ 2.31
NME3-206ENST00000564252 PICALMQ13492 652 aa29.46■■■□□ 2.31
NME3-206ENST00000564252 KIF22Q14807 665 aa29.46■■■□□ 2.31
NME3-206ENST00000564252 GORABQ5T7V8 394 aa29.46■■■□□ 2.31
NME3-206ENST00000564252 ZSCAN29Q8IWY8 852 aaPredicted RBP29.46■■■□□ 2.31
NME3-206ENST00000564252 CXCL11O14625 94 aa29.45■■■□□ 2.31
NME3-206ENST00000564252 SLC9C1Q4G0N8 1177 aa29.45■■■□□ 2.31
NME3-206ENST00000564252 SCYL3Q8IZE3 742 aa29.45■■■□□ 2.31
NME3-206ENST00000564252 CPA4Q9UI42 421 aa29.45■■■□□ 2.31
NME3-206ENST00000564252 SLURP2P0DP57 97 aa29.44■■■□□ 2.3
NME3-206ENST00000564252 POLA2Q14181 598 aa29.44■■■□□ 2.3
NME3-206ENST00000564252 TBC1D9Q6ZT07 1266 aa29.44■■■□□ 2.3
NME3-206ENST00000564252 NSUN4Q96CB9 384 aaKnown RBP29.44■■■□□ 2.3
NME3-206ENST00000564252 GNRH1P01148 92 aa29.43■■■□□ 2.3
NME3-206ENST00000564252 MCAMP43121 646 aa29.43■■■□□ 2.3
NME3-206ENST00000564252 HNRNPUQ00839 825 aaKnown RBP eCLIP29.43■■■□□ 2.3
NME3-206ENST00000564252 GPAT2Q6NUI2 795 aa29.43■■■□□ 2.3
NME3-206ENST00000564252 NBPF11Q86T75 865 aa29.43■■■□□ 2.3
NME3-206ENST00000564252 DOCK1Q14185 1865 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 PTPRAP18433 802 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 EN2P19622 333 aaPredicted RBP29.42■■■□□ 2.3
NME3-206ENST00000564252 CTGFP29279 349 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 GSTO1P78417 241 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 PICK1Q9NRD5 415 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 ZHX2Q9Y6X8 837 aa29.42■■■□□ 2.3
NME3-206ENST00000564252 NPM3O75607 178 aaKnown RBP29.41■■■□□ 2.3
NME3-206ENST00000564252 SSH3Q8TE77 659 aa29.41■■■□□ 2.3
NME3-206ENST00000564252 AFG3L2Q9Y4W6 797 aa29.41■■■□□ 2.3
NME3-206ENST00000564252 PHIPQ8WWQ0 1821 aa29.41■■■□□ 2.3
NME3-206ENST00000564252 A0A0G2JLL6 359 aaPredicted RBP29.4■■■□□ 2.3
NME3-206ENST00000564252 LDHCP07864 332 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 UQCRFS1P1P0C7P4 283 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 PRRT2Q7Z6L0 340 aaPredicted RBP29.4■■■□□ 2.3
NME3-206ENST00000564252 MIER1Q8N108 512 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 TMEM106CQ9BVX2 250 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 GPR108Q9NPR9 543 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 RAI14Q9P0K7 980 aa29.4■■■□□ 2.3
NME3-206ENST00000564252 PTPRFP10586 1907 aa29.39■■■□□ 2.3
NME3-206ENST00000564252 CTNND1O60716 968 aaKnown RBP29.39■■■□□ 2.3
NME3-206ENST00000564252 MAP4K4O95819 1239 aaPredicted RBP29.39■■■□□ 2.3
NME3-206ENST00000564252 PRMT2P55345 433 aa29.39■■■□□ 2.3
NME3-206ENST00000564252 ATP8B2P98198 1209 aa29.39■■■□□ 2.3
NME3-206ENST00000564252 TRIM47Q96LD4 638 aa29.39■■■□□ 2.3
NME3-206ENST00000564252 PARK7Q99497 189 aaKnown RBP29.39■■■□□ 2.3
NME3-206ENST00000564252 COL2A1P02458 1487 aaPredicted RBP29.38■■■□□ 2.29
NME3-206ENST00000564252 ECM2O94769 699 aaPredicted RBP29.38■■■□□ 2.29
NME3-206ENST00000564252 PSMC4P43686 418 aa29.38■■■□□ 2.29
NME3-206ENST00000564252 TNNI3KQ59H18 835 aa29.38■■■□□ 2.29
NME3-206ENST00000564252 SH3TC2Q8TF17 1288 aa29.38■■■□□ 2.29
NME3-206ENST00000564252 C1orf115Q9H7X2 142 aa29.38■■■□□ 2.29
NME3-206ENST00000564252 FPGT-TNNI3KV9GXZ4 949 aa29.38■■■□□ 2.29
NME3-206ENST00000564252 TBC1D12O60347 775 aa29.37■■■□□ 2.29
NME3-206ENST00000564252 CYP2C8P10632 490 aa29.37■■■□□ 2.29
NME3-206ENST00000564252 FASTKD5Q7L8L6 764 aaKnown RBP29.37■■■□□ 2.29
NME3-206ENST00000564252 BCRP11274 1271 aa29.36■■■□□ 2.29
NME3-206ENST00000564252 FTSJ3Q8IY81 847 aaKnown RBP29.36■■■□□ 2.29
NME3-206ENST00000564252 DBNDD2Q9BQY9 259 aa29.36■■■□□ 2.29
NME3-206ENST00000564252 LRP2BPQ9P2M1 347 aa29.36■■■□□ 2.29
NME3-206ENST00000564252 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.36■■■□□ 2.29
NME3-206ENST00000564252 SRRDQ9UH36 339 aa29.36■■■□□ 2.29
NME3-206ENST00000564252 MAST2Q6P0Q8 1798 aa29.35■■■□□ 2.29
NME3-206ENST00000564252 RLBP1P12271 317 aa29.35■■■□□ 2.29
NME3-206ENST00000564252 OS9Q13438 667 aaPredicted RBP29.35■■■□□ 2.29
NME3-206ENST00000564252 TTC39AQ5SRH9 613 aa29.35■■■□□ 2.29
NME3-206ENST00000564252 OSBPL5Q9H0X9 879 aaPredicted RBP29.35■■■□□ 2.29
NME3-206ENST00000564252 FAM196BA6NMK8 535 aa29.34■■■□□ 2.29
NME3-206ENST00000564252 ZBTB7BO15156 539 aaPredicted RBP29.34■■■□□ 2.29
NME3-206ENST00000564252 OSBPP22059 807 aa29.34■■■□□ 2.29
NME3-206ENST00000564252 GADL1Q6ZQY3 521 aa29.34■■■□□ 2.29
NME3-206ENST00000564252 ITPRIPQ8IWB1 547 aa29.34■■■□□ 2.29
NME3-206ENST00000564252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.34■■■□□ 2.29
NME3-206ENST00000564252 SNRKQ9NRH2 765 aa29.34■■■□□ 2.29
NME3-206ENST00000564252 SURF6O75683 361 aaKnown RBP29.33■■■□□ 2.29
NME3-206ENST00000564252 FMNL1O95466 1100 aaPredicted RBP29.33■■■□□ 2.29
NME3-206ENST00000564252 MYCP01106 439 aaPredicted RBP29.33■■■□□ 2.29
NME3-206ENST00000564252 SLC4A8Q2Y0W8 1093 aa29.33■■■□□ 2.29
NME3-206ENST00000564252 CCDC84Q86UT8 332 aaPredicted RBP29.33■■■□□ 2.29
NME3-206ENST00000564252 SLC45A1Q9Y2W3 748 aa29.33■■■□□ 2.29
NME3-206ENST00000564252 NOP58Q9Y2X3 529 aaKnown RBP29.33■■■□□ 2.29
NME3-206ENST00000564252 TRIM75PA6NK02 468 aa29.32■■■□□ 2.28
NME3-206ENST00000564252 CCDC158Q5M9N0 1113 aa29.32■■■□□ 2.28
NME3-206ENST00000564252 TEX11Q8IYF3 940 aa29.32■■■□□ 2.28
NME3-206ENST00000564252 SH3RF3Q8TEJ3 882 aaPredicted RBP29.32■■■□□ 2.28
NME3-206ENST00000564252 HOXD10P28358 340 aa29.31■■■□□ 2.28
NME3-206ENST00000564252 MGAMO43451 1857 aa29.31■■■□□ 2.28
NME3-206ENST00000564252 MYPNQ86TC9 1320 aa29.3■■■□□ 2.28
NME3-206ENST00000564252 CYP2E1P05181 493 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms