RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 TTC16Q8NEE8 873 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 PBX4Q9BYU1 374 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 SALL4Q9UJQ4 1053 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 POLIQ9UNA4 740 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 MST1RQ04912 1400 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 ADGRL3Q9HAR2 1447 aa7.34□□□□□ -1.23
CNOT1-205ENST00000563283 MSH6P52701 1360 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 KIAA1210Q9ULL0 1709 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 A6NHS1 94 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-205ENST00000563283 CDC27P30260 824 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 FKBP4Q02790 459 aaKnown RBP eCLIP7.33□□□□□ -1.24
CNOT1-205ENST00000563283 ADAMTSL4Q6UY14 1074 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
CNOT1-205ENST00000563283 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
CNOT1-205ENST00000563283 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-205ENST00000563283 TRPM1Q7Z4N2 1603 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 FZD6O60353 706 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 CES1P23141 567 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 USP5P45974 858 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 IREB2P48200 963 aaKnown RBP7.32□□□□□ -1.24
CNOT1-205ENST00000563283 ZNF211Q13398 564 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-205ENST00000563283 BRINP3Q76B58 766 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
CNOT1-205ENST00000563283 TP53INP1Q96A56 240 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 KRTAP9-2Q9BYQ4 174 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-205ENST00000563283 DCCP43146 1447 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 DLC1Q96QB1 1528 aa7.32□□□□□ -1.24
CNOT1-205ENST00000563283 USP32Q8NFA0 1604 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 LINC01387J3KSC0 135 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 ABL1P00519 1130 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 PTPRAP18433 802 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 EHHADHQ08426 723 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 ARHGEF28Q8N1W1 1705 aaKnown RBP7.31□□□□□ -1.24
CNOT1-205ENST00000563283 TMEM130Q8N3G9 435 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 PMEPA1Q969W9 287 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 MEGF10Q96KG7 1140 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 PRAM1Q96QH2 718 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 ORAI2Q96SN7 254 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 ADAM19Q9H013 955 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 FMN2Q9NZ56 1722 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 TRAK1Q9UPV9 953 aa7.31□□□□□ -1.24
CNOT1-205ENST00000563283 COL16A1Q07092 1604 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-205ENST00000563283 CLSPNQ9HAW4 1339 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 CDC42BPGQ6DT37 1551 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-205ENST00000563283 ACPPP15309 386 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 ATF3P18847 181 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 AAMPQ13685 434 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 GJD3Q8N144 294 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 GALNT11Q8NCW6 608 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 SNX29Q8TEQ0 813 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 POP1Q99575 1024 aaKnown RBP7.3□□□□□ -1.24
CNOT1-205ENST00000563283 AKTIPQ9H8T0 292 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 ANO2Q9NQ90 1003 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 DZANK1Q9NVP4 752 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 C1orf167Q5SNV9 1468 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 PHLPP1O60346 1717 aa7.3□□□□□ -1.24
CNOT1-205ENST00000563283 NFKBIEO00221 500 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 TM4SF5O14894 197 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 ICMTO60725 284 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 TNFRSF21O75509 655 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 EPHA1P21709 976 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 SAFB2Q14151 953 aaKnown RBP eCLIP7.29□□□□□ -1.24
CNOT1-205ENST00000563283 PRSS36Q5K4E3 855 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 TXNDC11Q6PKC3 985 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 Q6ZS46 218 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 ARID3AQ99856 593 aa7.29□□□□□ -1.24
CNOT1-205ENST00000563283 AHDC1Q5TGY3 1603 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-205ENST00000563283 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 PHACTR2O75167 634 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-205ENST00000563283 ZMYM1Q5SVZ6 1142 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 FAM117BQ6P1L5 589 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-205ENST00000563283 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.28□□□□□ -1.24
CNOT1-205ENST00000563283 KRTAP1-3Q8IUG1 177 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 DZIP1LQ8IYY4 767 aaKnown RBP7.28□□□□□ -1.24
CNOT1-205ENST00000563283 Q8N3U1 123 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 SH2B1Q9NRF2 756 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-205ENST00000563283 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 TONSLQ96HA7 1378 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 ADGRB2O60241 1585 aa7.28□□□□□ -1.24
CNOT1-205ENST00000563283 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.24
CNOT1-205ENST00000563283 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 H3BRJ5 948 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-205ENST00000563283 FSCN2O14926 492 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 EREGO14944 169 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 ALX3O95076 343 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-205ENST00000563283 SERPINB4P48594 390 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 TMEM102Q8N9M5 508 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-205ENST00000563283 KLHL23Q8NBE8 558 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms