RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FOXD4L5Q5VV16 416 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 FOXD4L4Q8WXT5 416 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 SGIP1Q9BQI5 828 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 TOMM22Q9NS69 142 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 KIAA1551Q9HCM1 1747 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 FGRP09769 529 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 USP17L8P0C7I0 530 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 SYT1P21579 422 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 RHBDL3P58872 404 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 CLEC17AQ6ZS10 378 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 TGFBRAP1Q8WUH2 860 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 MCM9Q9NXL9 1143 aa21.25■□□□□ 0.99
COMMD4-208ENST00000563220 ANGEL1Q9UNK9 670 aaKnown RBP21.25■□□□□ 0.99
COMMD4-208ENST00000563220 TTF2Q9UNY4 1162 aaKnown RBP21.25■□□□□ 0.99
COMMD4-208ENST00000563220 KLF18A0A0U1RQI7 1052 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 GRIPAP1Q4V328 841 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 STRIP1Q5VSL9 837 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 NCOA5Q9HCD5 579 aaKnown RBP21.24■□□□□ 0.99
COMMD4-208ENST00000563220 DLEC1Q9Y238 1755 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 PPIP5K2O43314 1243 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 JAK2O60674 1132 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 DACT2Q5SW24 774 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 ARPP21Q9UBL0 812 aaPredicted RBP21.24■□□□□ 0.99
COMMD4-208ENST00000563220 HPS5Q9UPZ3 1129 aa21.24■□□□□ 0.99
COMMD4-208ENST00000563220 KIF13BQ9NQT8 1826 aa21.23■□□□□ 0.99
COMMD4-208ENST00000563220 CTDNEP1O95476 244 aa21.23■□□□□ 0.99
COMMD4-208ENST00000563220 PSMD1Q99460 953 aa21.23■□□□□ 0.99
COMMD4-208ENST00000563220 LY9Q9HBG7 655 aa21.23■□□□□ 0.99
COMMD4-208ENST00000563220 MYH2Q9UKX2 1941 aa21.23■□□□□ 0.99
COMMD4-208ENST00000563220 STX6O43752 255 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 BAG4O95429 457 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 SCNN1DP51172 638 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 TMEM67Q5HYA8 995 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 MAPKAPK5Q8IW41 473 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 TEX11Q8IYF3 940 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 GBP4Q96PP9 640 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 BAZ2AQ9UIF9 1905 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 USP17L3A6NCW0 530 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 USP17L4A6NCW7 530 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 YDJCA8MPS7 323 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 IFIT3O14879 490 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 PRDM1O75626 825 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 PLCG2P16885 1265 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 FKBP1AP62942 108 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 SLC4A8Q2Y0W8 1093 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 USP17L1Q7RTZ2 530 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 RAB11FIP4Q86YS3 637 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 NSUN7Q8NE18 718 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 SMARCC2Q8TAQ2 1214 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 ZKSCAN3Q9BRR0 538 aa21.22■□□□□ 0.99
COMMD4-208ENST00000563220 LLPHQ9BRT6 129 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 GOLGB1Q14789 3259 aaKnown RBP21.22■□□□□ 0.99
COMMD4-208ENST00000563220 PTGER2P43116 358 aa21.21■□□□□ 0.99
COMMD4-208ENST00000563220 ESR2Q92731 530 aa21.21■□□□□ 0.99
COMMD4-208ENST00000563220 WDR33Q9C0J8 1336 aaKnown RBP21.21■□□□□ 0.99
COMMD4-208ENST00000563220 GOLGA8BA8MQT2 603 aa21.2■□□□□ 0.98
COMMD4-208ENST00000563220 PCP11498 1178 aaKnown RBP21.2■□□□□ 0.98
COMMD4-208ENST00000563220 LIFRP42702 1097 aa21.2■□□□□ 0.98
COMMD4-208ENST00000563220 SGMS1Q86VZ5 419 aa21.2■□□□□ 0.98
COMMD4-208ENST00000563220 CHAMP1Q96JM3 812 aa21.2■□□□□ 0.98
COMMD4-208ENST00000563220 ZNF277Q9NRM2 450 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-208ENST00000563220 LARP1BQ659C4 914 aaKnown RBP21.2■□□□□ 0.98
COMMD4-208ENST00000563220 ORC4O43929 436 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
COMMD4-208ENST00000563220 HHIPL2Q6UWX4 724 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 KIAA0825Q8IV33 1275 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 DDX11Q96FC9 970 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 MTA3Q9BTC8 594 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 SAP30BPQ9UHR5 308 aaKnown RBP21.19■□□□□ 0.98
COMMD4-208ENST00000563220 MTMR6Q9Y217 621 aa21.19■□□□□ 0.98
COMMD4-208ENST00000563220 RANBP6O60518 1105 aaKnown RBP21.18■□□□□ 0.98
COMMD4-208ENST00000563220 ZSCAN22P10073 491 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-208ENST00000563220 PLCD1P51178 756 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 APOBEC3HQ6NTF7 200 aaKnown RBP21.18■□□□□ 0.98
COMMD4-208ENST00000563220 APOA5Q6Q788 366 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 SCN9AQ15858 1988 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 FLT1P17948 1338 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 SLC3A2P08195 630 aaKnown RBP21.18■□□□□ 0.98
COMMD4-208ENST00000563220 NFXL1Q6ZNB6 911 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 KLHL34Q8N239 644 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 TEKT1Q969V4 418 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 DYNLL2Q96FJ2 89 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 MRIQ9BWK5 157 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 CD2APQ9Y5K6 639 aa21.18■□□□□ 0.98
COMMD4-208ENST00000563220 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
COMMD4-208ENST00000563220 PPFIA3O75145 1194 aa21.17■□□□□ 0.98
COMMD4-208ENST00000563220 CRKP46108 304 aa21.17■□□□□ 0.98
COMMD4-208ENST00000563220 SART3Q15020 963 aaKnown RBP21.17■□□□□ 0.98
COMMD4-208ENST00000563220 SEC23AQ15436 765 aa21.17■□□□□ 0.98
COMMD4-208ENST00000563220 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms