RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 DACT1Q9NYF0 836 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 PA2G4Q9UQ80 394 aaKnown RBP9.91□□□□□ -0.82
CCDC33-209ENST00000560565 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 ATP6V0A2Q9Y487 856 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 TIAM2Q8IVF5 1701 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 TUBBP07437 444 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 SKILP12757 684 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 IARSP41252 1262 aaKnown RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 GRAPQ13588 217 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 TUBB2AQ13885 445 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 NECTIN1Q15223 517 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 TAF7LQ5H9L4 462 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 CTR9Q6PD62 1173 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 CWC27Q6UX04 472 aaKnown RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 NYAP1Q6ZVC0 841 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 TMC4Q7Z404 712 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 SP8Q8IXZ3 490 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 GRAPLQ8TC17 118 aaPredicted RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 LEO1Q8WVC0 666 aaPredicted RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 DDX11Q96FC9 970 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 TUBB2BQ9BVA1 445 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.82
CCDC33-209ENST00000560565 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.82
CCDC33-209ENST00000560565 A0A0C4DFX4 3053 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 ZSCAN12O43309 604 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 RPS6KB1P23443 525 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
CCDC33-209ENST00000560565 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 TMCO3Q6UWJ1 677 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
CCDC33-209ENST00000560565 TTC6Q86TZ1 520 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 JDP2Q8WYK2 163 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 ARID3AQ99856 593 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 OSBPL5Q9H0X9 879 aaPredicted RBP9.89□□□□□ -0.83
CCDC33-209ENST00000560565 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
CCDC33-209ENST00000560565 PHLPP2Q6ZVD8 1323 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 DHX16O60231 1041 aaKnown RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 VEGFAP15692 232 aaPredicted RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 ITGA6P23229 1130 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SFPQP23246 707 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 RPS8P62241 208 aaKnown RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SNW1Q13573 536 aaKnown RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 TNNI3KQ59H18 835 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 DPP8Q6V1X1 898 aaPredicted RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 ATG9AQ7Z3C6 839 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 AACSQ86V21 672 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 LUZP1Q86V48 1076 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 LARGE2Q8N3Y3 721 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 GOLGA6L1Q8N7Z2 621 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SUPT20HQ8NEM7 779 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 CELF1Q92879 486 aaKnown RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SIL1Q9H173 461 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 L2HGDHQ9H9P8 463 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 FAM53CQ9NYF3 392 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 CEP126Q9P2H0 1117 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 RBM8AQ9Y5S9 174 aaKnown RBP9.88□□□□□ -0.83
CCDC33-209ENST00000560565 FPGT-TNNI3KV9GXZ4 949 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 DOCK2Q92608 1830 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 ZNF609O15014 1411 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 SNED1Q8TER0 1413 aa9.88□□□□□ -0.83
CCDC33-209ENST00000560565 MYO5AQ9Y4I1 1855 aaKnown RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 MROH5Q6ZUA9 1318 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 A0A1W2PQ27 194 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 A0A1W2PQ64 194 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 A0A1W2PQD8 194 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 DDNO94850 711 aaPredicted RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 FGD1P98174 961 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 ME3Q16798 604 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 NOM1Q5C9Z4 860 aaKnown RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 SLC51AQ86UW1 340 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 CCAR2Q8N163 923 aaKnown RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 EAF2Q96CJ1 260 aaPredicted RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 CDC5LQ99459 802 aaKnown RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 VPS33BQ9H267 617 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 GREM2Q9H772 168 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 HOOK1Q9UJC3 728 aaKnown RBP9.87□□□□□ -0.83
CCDC33-209ENST00000560565 RIPOR2Q9Y4F9 1068 aa9.87□□□□□ -0.83
CCDC33-209ENST00000560565 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 FZD9O00144 591 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 SLC27A2O14975 620 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 PPIP5K2O43314 1243 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 ATP5JP18859 108 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 IGHMBP2P38935 993 aaKnown RBP9.86□□□□□ -0.83
CCDC33-209ENST00000560565 CTCFP49711 727 aaPredicted RBP9.86□□□□□ -0.83
CCDC33-209ENST00000560565 EIF6P56537 245 aaKnown RBP9.86□□□□□ -0.83
CCDC33-209ENST00000560565 TFCP2Q12800 502 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 LDHAL6AQ6ZMR3 332 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
CCDC33-209ENST00000560565 RASEFQ8IZ41 740 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 MNS1Q8NEH6 495 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms