RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZNF341Q9BYN7 854 aa16.14■□□□□ 0.17
SMAD3-213ENST00000560175 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
SMAD3-213ENST00000560175 ADGRA1Q86SQ6 560 aa16.13■□□□□ 0.17
SMAD3-213ENST00000560175 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
SMAD3-213ENST00000560175 ANTXR1Q9H6X2 564 aa16.13■□□□□ 0.17
SMAD3-213ENST00000560175 TSKSQ9UJT2 592 aa16.13■□□□□ 0.17
SMAD3-213ENST00000560175 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
SMAD3-213ENST00000560175 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-213ENST00000560175 SPDYE5A6NIY4 337 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 TBC1D12O60347 775 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
SMAD3-213ENST00000560175 ATP5JP18859 108 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 NOL9Q5SY16 702 aaKnown RBP16.12■□□□□ 0.17
SMAD3-213ENST00000560175 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 OPTNQ96CV9 577 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 ELP3Q9H9T3 547 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 CSADQ9Y600 493 aa16.12■□□□□ 0.17
SMAD3-213ENST00000560175 APBB1O00213 710 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 BAG3O95817 575 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 PLCG2P16885 1265 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 MKRN3Q13064 507 aaKnown RBP16.11■□□□□ 0.17
SMAD3-213ENST00000560175 AAMPQ13685 434 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-213ENST00000560175 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 ZKSCAN4Q969J2 545 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-213ENST00000560175 PTPN18Q99952 460 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
SMAD3-213ENST00000560175 INPP5BP32019 993 aa16.1■□□□□ 0.17
SMAD3-213ENST00000560175 METTL16Q86W50 562 aaKnown RBP16.1■□□□□ 0.17
SMAD3-213ENST00000560175 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
SMAD3-213ENST00000560175 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-213ENST00000560175 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
SMAD3-213ENST00000560175 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
SMAD3-213ENST00000560175 OSBPL5Q9H0X9 879 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-213ENST00000560175 AATFQ9NY61 560 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMAD3-213ENST00000560175 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMAD3-213ENST00000560175 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
SMAD3-213ENST00000560175 CYP7A1P22680 504 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 PPATQ06203 517 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 PPIL2Q13356 520 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 SIPA1L1O43166 1804 aa16.09■□□□□ 0.17
SMAD3-213ENST00000560175 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
SMAD3-213ENST00000560175 GTF2A2P52657 109 aa16.08■□□□□ 0.16
SMAD3-213ENST00000560175 PICALMQ13492 652 aa16.08■□□□□ 0.16
SMAD3-213ENST00000560175 HAUS7Q99871 368 aa16.08■□□□□ 0.16
SMAD3-213ENST00000560175 DHX36Q9H2U1 1008 aaKnown RBP16.08■□□□□ 0.16
SMAD3-213ENST00000560175 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.16
SMAD3-213ENST00000560175 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 IRF6O14896 467 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 TBC1D8O95759 1140 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 HDAC1Q13547 482 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-213ENST00000560175 MAGEB6Q8N7X4 407 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 BRI3BPQ8WY22 251 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
SMAD3-213ENST00000560175 NOL10Q9BSC4 688 aaKnown RBP16.07■□□□□ 0.16
SMAD3-213ENST00000560175 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
SMAD3-213ENST00000560175 MYH7P12883 1935 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 GPR25O00155 361 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 CTNND1O60716 968 aaKnown RBP16.06■□□□□ 0.16
SMAD3-213ENST00000560175 SLURP2P0DP57 97 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
SMAD3-213ENST00000560175 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-213ENST00000560175 TGFBRAP1Q8WUH2 860 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 BOLA2Q9H3K6 86 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 ZCCHC17Q9NP64 241 aaKnown RBP16.06■□□□□ 0.16
SMAD3-213ENST00000560175 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 PI4KBQ9UBF8 816 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 MYH1P12882 1939 aa16.06■□□□□ 0.16
SMAD3-213ENST00000560175 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 FLT1P17948 1338 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 GOLIM4O00461 696 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 PDE6AP16499 860 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-213ENST00000560175 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
SMAD3-213ENST00000560175 ECHDC1Q9NTX5 307 aa16.05■□□□□ 0.16
SMAD3-213ENST00000560175 HERC5Q9UII4 1024 aaKnown RBP16.05■□□□□ 0.16
SMAD3-213ENST00000560175 PTPRFP10586 1907 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 CXCL11O14625 94 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 CETPP11597 493 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 SNAPC2Q13487 334 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 MOGSQ13724 837 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 CCL15Q16663 113 aa16.04■□□□□ 0.16
SMAD3-213ENST00000560175 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-213ENST00000560175 PTPRAP18433 802 aa16.03■□□□□ 0.16
SMAD3-213ENST00000560175 ADD2P35612 726 aa16.03■□□□□ 0.16
SMAD3-213ENST00000560175 MAPKAPK5Q8IW41 473 aa16.03■□□□□ 0.16
SMAD3-213ENST00000560175 MIGA1Q8NAN2 632 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 325.8 ms