RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZC3H12AQ5D1E8 599 aaKnown RBP6.81□□□□□ -1.32
SPG11-218ENST00000559754 LLGL2Q6P1M3 1020 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 ZNF765Q7L2R6 523 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 SHISA5Q8N114 240 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 SSU72Q9NP77 194 aaKnown RBP6.81□□□□□ -1.32
SPG11-218ENST00000559754 CYP8B1Q9UNU6 501 aa6.81□□□□□ -1.32
SPG11-218ENST00000559754 ANKRD33BA6NCL7 494 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 PRNPP04156 253 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 BMP6P22004 513 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 IRAK1P51617 712 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 SV2BQ7L1I2 683 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 BSDC1Q9NW68 430 aaPredicted RBP6.8□□□□□ -1.32
SPG11-218ENST00000559754 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
SPG11-218ENST00000559754 DYNC1LI2O43237 492 aaPredicted RBP6.79□□□□□ -1.32
SPG11-218ENST00000559754 FBXO24O75426 580 aa6.79□□□□□ -1.32
SPG11-218ENST00000559754 HCLS1P14317 486 aaPredicted RBP6.79□□□□□ -1.32
SPG11-218ENST00000559754 FBXL18Q96ME1 805 aa6.79□□□□□ -1.32
SPG11-218ENST00000559754 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
SPG11-218ENST00000559754 TTF2Q9UNY4 1162 aaKnown RBP6.79□□□□□ -1.32
SPG11-218ENST00000559754 OAS3Q9Y6K5 1087 aaKnown RBP6.79□□□□□ -1.32
SPG11-218ENST00000559754 PAGE1O75459 146 aa6.78□□□□□ -1.32
SPG11-218ENST00000559754 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPG11-218ENST00000559754 GRIN3AQ8TCU5 1115 aa6.78□□□□□ -1.32
SPG11-218ENST00000559754 PICK1Q9NRD5 415 aa6.78□□□□□ -1.32
SPG11-218ENST00000559754 CCDC39Q9UFE4 941 aa6.78□□□□□ -1.32
SPG11-218ENST00000559754 AK5Q9Y6K8 562 aa6.78□□□□□ -1.32
SPG11-218ENST00000559754 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 CDK5R2Q13319 367 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 PCNX4Q63HM2 1172 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 ISL2Q96A47 359 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 PCDHA4Q9UN74 947 aa6.77□□□□□ -1.33
SPG11-218ENST00000559754 COL17A1Q9UMD9 1497 aaPredicted RBP6.77□□□□□ -1.33
SPG11-218ENST00000559754 FANCGO15287 622 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 NEFMP07197 916 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 CELA3AP09093 270 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 LMNB1P20700 586 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 KCT2Q8NC54 265 aa6.76□□□□□ -1.33
SPG11-218ENST00000559754 DUSP9Q99956 384 aaKnown RBP6.76□□□□□ -1.33
SPG11-218ENST00000559754 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
SPG11-218ENST00000559754 MPRIPQ6WCQ1 1025 aa6.75□□□□□ -1.33
SPG11-218ENST00000559754 CDC37L1Q7L3B6 337 aa6.75□□□□□ -1.33
SPG11-218ENST00000559754 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
SPG11-218ENST00000559754 AGBL5Q8NDL9 886 aa6.75□□□□□ -1.33
SPG11-218ENST00000559754 ELMO3Q96BJ8 720 aa6.75□□□□□ -1.33
SPG11-218ENST00000559754 DCDC2CA8MYV0 355 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 ERCC3P19447 782 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 RPS26P62854 115 aaKnown RBP6.74□□□□□ -1.33
SPG11-218ENST00000559754 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
SPG11-218ENST00000559754 PPM1JQ5JR12 505 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 TTBK2Q6IQ55 1244 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 TP53INP2Q8IXH6 220 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 FLCNQ8NFG4 579 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 MISP3Q96FF7 219 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 DUSP23Q9BVJ7 150 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 MKNK2Q9HBH9 465 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 CSADQ9Y600 493 aa6.74□□□□□ -1.33
SPG11-218ENST00000559754 ITGAEP38570 1179 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 XPCQ01831 940 aaPredicted RBP6.73□□□□□ -1.33
SPG11-218ENST00000559754 RING1Q06587 406 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 HDXQ7Z353 690 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 C12orf40Q86WS4 652 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 ZNF507Q8TCN5 953 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 NETO1Q8TDF5 533 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 SLC5A6Q9Y289 635 aa6.73□□□□□ -1.33
SPG11-218ENST00000559754 PAX4O43316 350 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 RLBP1P12271 317 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 DAB2P98082 770 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 PSMD2Q13200 908 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 RASIP1Q5U651 963 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
SPG11-218ENST00000559754 TOP6BLQ8N6T0 577 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
SPG11-218ENST00000559754 LEFTY1O75610 366 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 TAL1P17542 331 aaPredicted RBP6.71□□□□□ -1.34
SPG11-218ENST00000559754 NTF4P34130 210 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 CCDC27Q2M243 656 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
SPG11-218ENST00000559754 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 BCL7CQ8WUZ0 217 aaPredicted RBP6.71□□□□□ -1.34
SPG11-218ENST00000559754 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 GTF2IRD1Q9UHL9 959 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 ADGRE2Q9UHX3 823 aa6.71□□□□□ -1.34
SPG11-218ENST00000559754 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 LRIG2O94898 1065 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
SPG11-218ENST00000559754 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
SPG11-218ENST00000559754 LRFN4Q6PJG9 635 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms