RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TNFAIP1Q13829 316 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 MAP3K11Q16584 847 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 TEX11Q8IYF3 940 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 PHIPQ8WWQ0 1821 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 FAM155AB1AL88 458 aaPredicted RBP13.85□□□□□ -0.19
SNX1-204ENST00000559061 SMIM22K7EJ46 135 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 FOXP2O15409 715 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 PRKAB2O43741 272 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 USP2O75604 605 aaPredicted RBP13.85□□□□□ -0.19
SNX1-204ENST00000559061 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
SNX1-204ENST00000559061 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
SNX1-204ENST00000559061 OSBPL5Q9H0X9 879 aaPredicted RBP13.85□□□□□ -0.19
SNX1-204ENST00000559061 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 ATAD5Q96QE3 1844 aa13.85□□□□□ -0.19
SNX1-204ENST00000559061 MAGEB6P1A0A0J9YX57 407 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 RNF113AO15541 343 aaKnown RBP13.84□□□□□ -0.19
SNX1-204ENST00000559061 MBD4O95243 580 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 PRKG1Q13976 671 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 CLMNQ96JQ2 1002 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 PCNTO95613 3336 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
SNX1-204ENST00000559061 NEFLP07196 543 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 TNNI2P48788 182 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 MAP3K10Q02779 954 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.2
SNX1-204ENST00000559061 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.83□□□□□ -0.2
SNX1-204ENST00000559061 SDR42E1Q8WUS8 393 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 APPBP2Q92624 585 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 EVI5LQ96CN4 794 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 FSD1Q9BTV5 496 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 14.6
SNX1-204ENST00000559061 IL25Q9H293 177 aa13.83□□□□□ -0.2
SNX1-204ENST00000559061 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
SNX1-204ENST00000559061 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
SNX1-204ENST00000559061 A0A0D9SFI3 127 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 BAG3O95817 575 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 GJA5P36382 358 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 VEGFBP49765 207 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 HUNKP57058 714 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 FKBP1BP68106 108 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 CYP4F22Q6NT55 531 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.82□□□□□ -0.2
SNX1-204ENST00000559061 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 RASAL3Q86YV0 1011 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 KLRG1Q96E93 195 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 HHIPL1Q96JK4 782 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 FAM227BQ96M60 508 aa13.82□□□□□ -0.2
SNX1-204ENST00000559061 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
SNX1-204ENST00000559061 EPB41L4AQ9HCS5 686 aaPredicted RBP13.82□□□□□ -0.2
SNX1-204ENST00000559061 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
SNX1-204ENST00000559061 ANGEL1Q9UNK9 670 aaKnown RBP13.82□□□□□ -0.2
SNX1-204ENST00000559061 CYP2D6P10635 497 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 PLCG2P16885 1265 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 SHROOM1Q2M3G4 852 aaPredicted RBP13.81□□□□□ -0.2
SNX1-204ENST00000559061 SUPT20HL1Q3ZLR7 823 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
SNX1-204ENST00000559061 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 CSRNP1Q96S65 589 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 DCP1AQ9NPI6 582 aaPredicted RBP13.81□□□□□ -0.2
SNX1-204ENST00000559061 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 ZNF112Q9UJU3 913 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
SNX1-204ENST00000559061 PTPRFP10586 1907 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 GSG1L2A8MUP6 293 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 GPAA1O43292 621 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
SNX1-204ENST00000559061 SLC10A3P09131 477 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 SDSP20132 328 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 INPP5BP32019 993 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 JAG1P78504 1218 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 SLC4A8Q2Y0W8 1093 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 RGMBQ6NW40 437 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
SNX1-204ENST00000559061 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.8□□□□□ -0.2
SNX1-204ENST00000559061 SNCAIPQ9Y6H5 919 aa13.8□□□□□ -0.2
SNX1-204ENST00000559061 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 AOC2O75106 756 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 PLCD1P51178 756 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
SNX1-204ENST00000559061 VGLL4Q14135 290 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 CAPNS2Q96L46 248 aa13.79□□□□□ -0.2
SNX1-204ENST00000559061 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
SNX1-204ENST00000559061 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms