RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZNF112Q9UJU3 913 aa19.14■□□□□ 0.65
TPM1-211ENST00000558314 PDE4DIPQ5VU43 2346 aa19.14■□□□□ 0.65
TPM1-211ENST00000558314 TTC39AQ5SRH9 613 aa19.13■□□□□ 0.65
TPM1-211ENST00000558314 GADL1Q6ZQY3 521 aa19.13■□□□□ 0.65
TPM1-211ENST00000558314 SH3BP5LQ7L8J4 393 aa19.13■□□□□ 0.65
TPM1-211ENST00000558314 TMEM106CQ9BVX2 250 aa19.13■□□□□ 0.65
TPM1-211ENST00000558314 ZHX2Q9Y6X8 837 aa19.13■□□□□ 0.65
TPM1-211ENST00000558314 PDS5AQ29RF7 1337 aaKnown RBP19.12■□□□□ 0.65
TPM1-211ENST00000558314 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
TPM1-211ENST00000558314 GSTO1P78417 241 aa19.12■□□□□ 0.65
TPM1-211ENST00000558314 LACTBP83111 547 aaPredicted RBP19.12■□□□□ 0.65
TPM1-211ENST00000558314 SLC4A8Q2Y0W8 1093 aa19.12■□□□□ 0.65
TPM1-211ENST00000558314 NOL9Q5SY16 702 aaKnown RBP19.12■□□□□ 0.65
TPM1-211ENST00000558314 ANKRD23Q86SG2 305 aa19.12■□□□□ 0.65
TPM1-211ENST00000558314 SCYL3Q8IZE3 742 aa19.12■□□□□ 0.65
TPM1-211ENST00000558314 FAM196BA6NMK8 535 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 LDHCP07864 332 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 UQCRFS1P1P0C7P4 283 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 MCAMP43121 646 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 NBPF11Q86T75 865 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 CCDC84Q86UT8 332 aaPredicted RBP19.11■□□□□ 0.65
TPM1-211ENST00000558314 SH3TC2Q8TF17 1288 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 NOL10Q9BSC4 688 aaKnown RBP19.11■□□□□ 0.65
TPM1-211ENST00000558314 ZCCHC17Q9NP64 241 aaKnown RBP19.11■□□□□ 0.65
TPM1-211ENST00000558314 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.11■□□□□ 0.65
TPM1-211ENST00000558314 KCNH4Q9UQ05 1017 aa19.11■□□□□ 0.65
TPM1-211ENST00000558314 GPR75-ASB3A0A0A6YYF3 556 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 PHF20L1A8MW92 1017 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 CYP2C8P10632 490 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 EN2P19622 333 aaPredicted RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 ARID4AP29374 1257 aaPredicted RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 TNNI3KQ59H18 835 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 CCDC158Q5M9N0 1113 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 PRPF38BQ5VTL8 546 aaKnown RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 TEX11Q8IYF3 940 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 ZNF384Q8TF68 577 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 ARMC5Q96C12 935 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 NSUN4Q96CB9 384 aaKnown RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 FAM163AQ96GL9 167 aaPredicted RBP19.1■□□□□ 0.65
TPM1-211ENST00000558314 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.1■□□□□ 0.65
TPM1-211ENST00000558314 FPGT-TNNI3KV9GXZ4 949 aa19.1■□□□□ 0.65
TPM1-211ENST00000558314 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
TPM1-211ENST00000558314 TRIM75PA6NK02 468 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 PTPRAP18433 802 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 PSMC4P43686 418 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 RHBDL3P58872 404 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 BCL11AQ9H165 835 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 ZSWIM8A7E2V4 1837 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 DOCK2Q92608 1830 aa19.09■□□□□ 0.65
TPM1-211ENST00000558314 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
TPM1-211ENST00000558314 CXCL11O14625 94 aa19.08■□□□□ 0.64
TPM1-211ENST00000558314 RLBP1P12271 317 aa19.08■□□□□ 0.64
TPM1-211ENST00000558314 POLA2Q14181 598 aa19.08■□□□□ 0.64
TPM1-211ENST00000558314 C17orf99Q6UX52 265 aa19.08■□□□□ 0.64
TPM1-211ENST00000558314 PARK7Q99497 189 aaKnown RBP19.08■□□□□ 0.64
TPM1-211ENST00000558314 RFX7Q2KHR2 1363 aa19.07■□□□□ 0.64
TPM1-211ENST00000558314 MOGSQ13724 837 aa19.07■□□□□ 0.64
TPM1-211ENST00000558314 SH3RF3Q8TEJ3 882 aaPredicted RBP19.07■□□□□ 0.64
TPM1-211ENST00000558314 ZNF333Q96JL9 665 aa19.07■□□□□ 0.64
TPM1-211ENST00000558314 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
TPM1-211ENST00000558314 AATFQ9NY61 560 aaKnown RBP eCLIP19.07■□□□□ 0.64
TPM1-211ENST00000558314 ZBTB22O15209 634 aa19.06■□□□□ 0.64
TPM1-211ENST00000558314 CTNND1O60716 968 aaKnown RBP19.06■□□□□ 0.64
TPM1-211ENST00000558314 NAA16Q6N069 864 aaPredicted RBP19.06■□□□□ 0.64
TPM1-211ENST00000558314 GPAT2Q6NUI2 795 aa19.06■□□□□ 0.64
TPM1-211ENST00000558314 FASTKD5Q7L8L6 764 aaKnown RBP19.06■□□□□ 0.64
TPM1-211ENST00000558314 RAET1EQ8TD07 263 aa19.06■□□□□ 0.64
TPM1-211ENST00000558314 SSH3Q8TE77 659 aa19.06■□□□□ 0.64
TPM1-211ENST00000558314 TRIM47Q96LD4 638 aa19.06■□□□□ 0.64
TPM1-211ENST00000558314 BIN2Q9UBW5 565 aaPredicted RBP19.06■□□□□ 0.64
TPM1-211ENST00000558314 HOXD10P28358 340 aa19.05■□□□□ 0.64
TPM1-211ENST00000558314 CTGFP29279 349 aa19.05■□□□□ 0.64
TPM1-211ENST00000558314 PANK1Q8TE04 598 aa19.05■□□□□ 0.64
TPM1-211ENST00000558314 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
TPM1-211ENST00000558314 AFG3L2Q9Y4W6 797 aa19.05■□□□□ 0.64
TPM1-211ENST00000558314 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
TPM1-211ENST00000558314 A0A0G2JLL6 359 aaPredicted RBP19.04■□□□□ 0.64
TPM1-211ENST00000558314 BAG3O95817 575 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 OSBPP22059 807 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 ZAP70P43403 619 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 PRRT2Q7Z6L0 340 aaPredicted RBP19.04■□□□□ 0.64
TPM1-211ENST00000558314 MAPKAPK5Q8IW41 473 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 SMCR8Q8TEV9 937 aaPredicted RBP19.04■□□□□ 0.64
TPM1-211ENST00000558314 TRIM34Q9BYJ4 488 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 GPR108Q9NPR9 543 aa19.04■□□□□ 0.64
TPM1-211ENST00000558314 TLR7Q9NYK1 1049 aaKnown RBP19.04■□□□□ 0.64
TPM1-211ENST00000558314 MYPNQ86TC9 1320 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
TPM1-211ENST00000558314 SLC34A2O95436 690 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 GNRH1P01148 92 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 TGFBRAP1Q8WUH2 860 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 SRRDQ9UH36 339 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 TAOK2Q9UL54 1235 aa19.03■□□□□ 0.64
TPM1-211ENST00000558314 ADGRA2Q96PE1 1338 aa19.02■□□□□ 0.64
TPM1-211ENST00000558314 APBB1O00213 710 aa19.02■□□□□ 0.64
TPM1-211ENST00000558314 CYP2E1P05181 493 aaPredicted RBP19.02■□□□□ 0.64
TPM1-211ENST00000558314 PRMT2P55345 433 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms