RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MYH2Q9UKX2 1941 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 GPR75-ASB3A0A0A6YYF3 556 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 CAP1Q01518 475 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 TBC1D9Q6ZT07 1266 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 SCYL3Q8IZE3 742 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
SHMT2-235ENST00000557740 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-235ENST00000557740 PDHXO00330 501 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 MCAMP43121 646 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 LACTBP83111 547 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-235ENST00000557740 TNNI3KQ59H18 835 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 TTC39AQ5SRH9 613 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 SH3BP5LQ7L8J4 393 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 ARMC5Q96C12 935 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
SHMT2-235ENST00000557740 GPR108Q9NPR9 543 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 FPGT-TNNI3KV9GXZ4 949 aa17.99■□□□□ 0.47
SHMT2-235ENST00000557740 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 DOCK2Q92608 1830 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 PHF20L1A8MW92 1017 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 CXCL11O14625 94 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 SURF6O75683 361 aaKnown RBP17.98■□□□□ 0.47
SHMT2-235ENST00000557740 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-235ENST00000557740 RHBDL3P58872 404 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 ATP8B2P98198 1209 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 SLC9C1Q4G0N8 1177 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 CCDC158Q5M9N0 1113 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 ZNF384Q8TF68 577 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 NOL10Q9BSC4 688 aaKnown RBP17.98■□□□□ 0.47
SHMT2-235ENST00000557740 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 ZHX2Q9Y6X8 837 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 HTTP42858 3142 aa17.98■□□□□ 0.47
SHMT2-235ENST00000557740 RLBP1P12271 317 aa17.97■□□□□ 0.47
SHMT2-235ENST00000557740 PARK7Q99497 189 aaKnown RBP17.97■□□□□ 0.47
SHMT2-235ENST00000557740 DBNDD2Q9BQY9 259 aa17.97■□□□□ 0.47
SHMT2-235ENST00000557740 ARHGAP39Q9C0H5 1083 aa17.97■□□□□ 0.47
SHMT2-235ENST00000557740 CPA4Q9UI42 421 aa17.97■□□□□ 0.47
SHMT2-235ENST00000557740 CTNND1O60716 968 aaKnown RBP17.96■□□□□ 0.47
SHMT2-235ENST00000557740 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
SHMT2-235ENST00000557740 GNRH1P01148 92 aa17.96■□□□□ 0.47
SHMT2-235ENST00000557740 PTPRAP18433 802 aa17.96■□□□□ 0.47
SHMT2-235ENST00000557740 PRPF38BQ5VTL8 546 aaKnown RBP17.96■□□□□ 0.47
SHMT2-235ENST00000557740 NBPF11Q86T75 865 aa17.96■□□□□ 0.47
SHMT2-235ENST00000557740 SNRKQ9NRH2 765 aa17.96■□□□□ 0.47
SHMT2-235ENST00000557740 TNRC18O15417 2968 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-235ENST00000557740 POTEFA5A3E0 1075 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 MAP3K10Q02779 954 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 MOGSQ13724 837 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 FASTKD5Q7L8L6 764 aaKnown RBP17.95■□□□□ 0.46
SHMT2-235ENST00000557740 TEX11Q8IYF3 940 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 ZNF333Q96JL9 665 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
SHMT2-235ENST00000557740 COL2A1P02458 1487 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-235ENST00000557740 A0A0G2JLL6 359 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 ZBTB7BO15156 539 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 NAA16Q6N069 864 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
SHMT2-235ENST00000557740 PRRT2Q7Z6L0 340 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 OSBPL5Q9H0X9 879 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
SHMT2-235ENST00000557740 ADGRA2Q96PE1 1338 aa17.94■□□□□ 0.46
SHMT2-235ENST00000557740 KIAA0100Q14667 2235 aaKnown RBP17.93■□□□□ 0.46
SHMT2-235ENST00000557740 TBC1D12O60347 775 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 BAG3O95817 575 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 PLCG2P16885 1265 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 PRMT2P55345 433 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 AFG3L2Q9Y4W6 797 aa17.93■□□□□ 0.46
SHMT2-235ENST00000557740 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 FAM196BA6NMK8 535 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 FMNL1O95466 1100 aaPredicted RBP17.92■□□□□ 0.46
SHMT2-235ENST00000557740 CYP2C8P10632 490 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 HOXD10P28358 340 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 PSMC4P43686 418 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 SLC4A8Q2Y0W8 1093 aa17.92■□□□□ 0.46
SHMT2-235ENST00000557740 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
SHMT2-235ENST00000557740 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
SHMT2-235ENST00000557740 AATFQ9NY61 560 aaKnown RBP eCLIP17.92■□□□□ 0.46
SHMT2-235ENST00000557740 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.92■□□□□ 0.46
SHMT2-235ENST00000557740 CEP85Q6P2H3 762 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 SH3TC2Q8TF17 1288 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 TRIM47Q96LD4 638 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 TLR7Q9NYK1 1049 aaKnown RBP17.91■□□□□ 0.46
SHMT2-235ENST00000557740 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
SHMT2-235ENST00000557740 SLC45A1Q9Y2W3 748 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 MAST2Q6P0Q8 1798 aa17.91■□□□□ 0.46
SHMT2-235ENST00000557740 DOCK1Q14185 1865 aa17.9■□□□□ 0.46
SHMT2-235ENST00000557740 MYCP01106 439 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 CYP2E1P05181 493 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 MS4A1P11836 297 aa17.9■□□□□ 0.46
SHMT2-235ENST00000557740 ZAP70P43403 619 aa17.9■□□□□ 0.46
SHMT2-235ENST00000557740 CCDC84Q86UT8 332 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms