RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-221ENST00000556342 CACNB3P54284 484 aa13.5□□□□□ -0.25
SYNE2-221ENST00000556342 CHAF1AQ13111 956 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-221ENST00000556342 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
SYNE2-221ENST00000556342 SNCAIPQ9Y6H5 919 aa13.5□□□□□ -0.25
SYNE2-221ENST00000556342 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
SYNE2-221ENST00000556342 EVI5O60447 810 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 TLR2O60603 784 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 WDHD1O75717 1129 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-221ENST00000556342 CETPP11597 493 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 CAVIN4Q5BKX8 364 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 WRNIP1Q96S55 665 aa13.49□□□□□ -0.25
SYNE2-221ENST00000556342 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
SYNE2-221ENST00000556342 UTYO14607 1347 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-221ENST00000556342 PBX2P40425 430 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 FXR1P51114 621 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNE2-221ENST00000556342 SNAPC2Q13487 334 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 RABL6Q3YEC7 729 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-221ENST00000556342 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 FAM83AQ86UY5 434 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 ZDHHC15Q96MV8 337 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
SYNE2-221ENST00000556342 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
SYNE2-221ENST00000556342 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 IRF6O14896 467 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 PDE8BO95263 885 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-221ENST00000556342 LACTBP83111 547 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-221ENST00000556342 PPIL2Q13356 520 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 KIF22Q14807 665 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
SYNE2-221ENST00000556342 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-221ENST00000556342 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 MRIQ9BWK5 157 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
SYNE2-221ENST00000556342 MAST3O60307 1309 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 CEP290O15078 2479 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 GNRH1P01148 92 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 BCAMP50895 628 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 DCAF15Q66K64 600 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 SPNS2Q8IVW8 549 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
SYNE2-221ENST00000556342 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-221ENST00000556342 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 PRMT2P55345 433 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 ZNF341Q9BYN7 854 aa13.45□□□□□ -0.26
SYNE2-221ENST00000556342 PPATQ06203 517 aa13.44□□□□□ -0.26
SYNE2-221ENST00000556342 C17orf99Q6UX52 265 aa13.44□□□□□ -0.26
SYNE2-221ENST00000556342 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-221ENST00000556342 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
SYNE2-221ENST00000556342 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
SYNE2-221ENST00000556342 FGFR2P21802 821 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 INPP5BP32019 993 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
SYNE2-221ENST00000556342 MIGA2Q7L4E1 593 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 CPA4Q9UI42 421 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 TRIOBPQ9H2D6 2365 aa13.43□□□□□ -0.26
SYNE2-221ENST00000556342 ZSWIM8A7E2V4 1837 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 H0YGN5 161 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 PDHXO00330 501 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 CTGFP29279 349 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 PSMC4P43686 418 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 MTFR1Q15390 333 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 E2F4Q16254 413 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 WDR66Q8TBY9 1149 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 TRIM47Q96LD4 638 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
SYNE2-221ENST00000556342 ADGRA2Q96PE1 1338 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 ANP32CO43423 234 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 OSBPP22059 807 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 HOXD10P28358 340 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 FOSBP53539 338 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 TCP10Q12799 353 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
SYNE2-221ENST00000556342 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 KCNH4Q9UQ05 1017 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 DAGLAQ9Y4D2 1042 aa13.41□□□□□ -0.26
SYNE2-221ENST00000556342 PTPRCP08575 1304 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 RANBP2P49792 3224 aaKnown RBP13.4□□□□□ -0.26
SYNE2-221ENST00000556342 EYA2O00167 538 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 DPYSL4O14531 572 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms