RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 NRSN2Q9GZP1 204 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 SNCAIPQ9Y6H5 919 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 A0A0A0MRY4 1105 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 LOC100289279A0A1B0GTE1 492 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 FAM221AA4D161 298 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 ELNP15502 786 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 COL9A3Q14050 684 aaPredicted RBP6.56□□□□□ -1.36
CDKN3-210ENST00000556305 REC114Q7Z4M0 266 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 REXO1Q8N1G1 1221 aaKnown RBP6.56□□□□□ -1.36
CDKN3-210ENST00000556305 GALNT11Q8NCW6 608 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 PLVAPQ9BX97 442 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 CCDC86Q9H6F5 360 aaKnown RBP6.56□□□□□ -1.36
CDKN3-210ENST00000556305 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
CDKN3-210ENST00000556305 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
CDKN3-210ENST00000556305 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 DEAF1O75398 565 aaPredicted RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 CRKP46108 304 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 PDE4BQ07343 736 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 FOXD4L6Q3SYB3 417 aaPredicted RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 FBXW10Q5XX13 1052 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 FOXD4L3Q6VB84 417 aaPredicted RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 ALYREFQ86V81 257 aaKnown RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 CKAP2LQ8IYA6 745 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 RUSC1Q9BVN2 902 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 SRRTQ9BXP5 876 aaKnown RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
CDKN3-210ENST00000556305 RNF208Q9H0X6 261 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 TACC3Q9Y6A5 838 aa6.55□□□□□ -1.36
CDKN3-210ENST00000556305 DLL1O00548 723 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 ITGB7P26010 798 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 KIF4BQ2VIQ3 1234 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 WIPI1Q5MNZ9 446 aaPredicted RBP6.54□□□□□ -1.36
CDKN3-210ENST00000556305 NUTM2GQ5VZR2 741 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 ACAD11Q709F0 780 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 ILDR2Q71H61 639 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 OR6P1Q8NGX9 317 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 DHX38Q92620 1227 aaKnown RBP6.54□□□□□ -1.36
CDKN3-210ENST00000556305 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
CDKN3-210ENST00000556305 ADAM11O75078 769 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 AOC2O75106 756 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
CDKN3-210ENST00000556305 LIG1P18858 919 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 EIF6P56537 245 aaKnown RBP6.53□□□□□ -1.36
CDKN3-210ENST00000556305 LRRFIP1Q32MZ4 808 aaKnown RBP6.53□□□□□ -1.36
CDKN3-210ENST00000556305 TNNI3KQ59H18 835 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 LINC00114Q6XXX2 140 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 GK5Q6ZS86 529 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 NACC1Q96RE7 527 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
CDKN3-210ENST00000556305 U2SURPO15042 1029 aaKnown RBP6.52□□□□□ -1.37
CDKN3-210ENST00000556305 DDX3YO15523 660 aaKnown RBP6.52□□□□□ -1.37
CDKN3-210ENST00000556305 ZNF862O60290 1169 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 ECEL1O95672 775 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 SNRPNP63162 240 aaKnown RBP6.52□□□□□ -1.37
CDKN3-210ENST00000556305 ID3Q02535 119 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 DNAJC2Q99543 621 aaKnown RBP6.52□□□□□ -1.37
CDKN3-210ENST00000556305 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 PCDHB14Q9Y5E9 798 aa6.52□□□□□ -1.37
CDKN3-210ENST00000556305 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 MEGF11A6BM72 1044 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 SPATA31C1P0DKV0 1188 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 COL8A1P27658 744 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-210ENST00000556305 AKAP4Q5JQC9 854 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 ANKRD34AQ69YU3 496 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 TRIM55Q9BYV6 548 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 SUGCTQ9HAC7 445 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 ZNRF3Q9ULT6 936 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 PPT2Q9UMR5 302 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
CDKN3-210ENST00000556305 SHROOM4Q9ULL8 1493 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 TM4SF5O14894 197 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 GRIN3BO60391 1043 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 ATE1O95260 518 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 APBA3O96018 575 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 CTSBP07858 339 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 ETF1P62495 437 aaKnown RBP6.5□□□□□ -1.37
CDKN3-210ENST00000556305 ERVK-24P63145 666 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 NRG1Q02297 640 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-210ENST00000556305 RBL2Q08999 1139 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 ZC3H12AQ5D1E8 599 aaKnown RBP6.5□□□□□ -1.37
CDKN3-210ENST00000556305 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms