RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 MTFR1Q15390 333 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
TGFB3-204ENST00000556285 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 DDX4Q9NQI0 724 aaKnown RBP16.46■□□□□ 0.23
TGFB3-204ENST00000556285 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
TGFB3-204ENST00000556285 KCNH4Q9UQ05 1017 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
TGFB3-204ENST00000556285 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
TGFB3-204ENST00000556285 PDHXO00330 501 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
TGFB3-204ENST00000556285 MECOMQ03112 1051 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
TGFB3-204ENST00000556285 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
TGFB3-204ENST00000556285 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
TGFB3-204ENST00000556285 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
TGFB3-204ENST00000556285 ENTPD3O75355 529 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 BTDP43251 543 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 PICALMQ13492 652 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
TGFB3-204ENST00000556285 GPAT2Q6NUI2 795 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
TGFB3-204ENST00000556285 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 SZT2Q5T011 3432 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
TGFB3-204ENST00000556285 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
TGFB3-204ENST00000556285 GNAI2P04899 355 aa16.43■□□□□ 0.22
TGFB3-204ENST00000556285 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
TGFB3-204ENST00000556285 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
TGFB3-204ENST00000556285 TMEM57Q8N5G2 664 aa16.43■□□□□ 0.22
TGFB3-204ENST00000556285 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
TGFB3-204ENST00000556285 LOC285556D6RIA3 1793 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 CYP2C8P10632 490 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 OSBPP22059 807 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
TGFB3-204ENST00000556285 RHBDL3P58872 404 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
TGFB3-204ENST00000556285 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
TGFB3-204ENST00000556285 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 GPR75-ASB3A0A0A6YYF3 556 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 PTPRAP18433 802 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 PSMC4P43686 418 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 KIF22Q14807 665 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 GABRQQ9UN88 632 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
TGFB3-204ENST00000556285 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
TGFB3-204ENST00000556285 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 BCRP11274 1271 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
TGFB3-204ENST00000556285 MCAMP43121 646 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
TGFB3-204ENST00000556285 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 AFG3L2Q9Y4W6 797 aa16.4■□□□□ 0.22
TGFB3-204ENST00000556285 CEP290O15078 2479 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 CXCL11O14625 94 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
TGFB3-204ENST00000556285 POLA2Q14181 598 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 PICK1Q9NRD5 415 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
TGFB3-204ENST00000556285 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
TGFB3-204ENST00000556285 H0YGN5 161 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 PRKCZQ05513 592 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
TGFB3-204ENST00000556285 MIER1Q8N108 512 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
TGFB3-204ENST00000556285 MAST2Q6P0Q8 1798 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 TRIM75PA6NK02 468 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
TGFB3-204ENST00000556285 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
TGFB3-204ENST00000556285 RLBP1P12271 317 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 RRP1BQ14684 758 aaKnown RBP16.37■□□□□ 0.21
TGFB3-204ENST00000556285 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
TGFB3-204ENST00000556285 GNRH1P01148 92 aa16.36■□□□□ 0.21
TGFB3-204ENST00000556285 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
TGFB3-204ENST00000556285 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
TGFB3-204ENST00000556285 TNNI3KQ59H18 835 aa16.36■□□□□ 0.21
TGFB3-204ENST00000556285 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms