RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 AATFQ9NY61 560 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNX6-203ENST00000555416 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
SNX6-203ENST00000555416 CYP7A1P22680 504 aa16.68■□□□□ 0.26
SNX6-203ENST00000555416 TM4SF4P48230 202 aa16.68■□□□□ 0.26
SNX6-203ENST00000555416 OPTNQ96CV9 577 aa16.68■□□□□ 0.26
SNX6-203ENST00000555416 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
SNX6-203ENST00000555416 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
SNX6-203ENST00000555416 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
SNX6-203ENST00000555416 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 GOLIM4O00461 696 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 TEX11Q8IYF3 940 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNX6-203ENST00000555416 ZNF112Q9UJU3 913 aa16.67■□□□□ 0.26
SNX6-203ENST00000555416 CA12O43570 354 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 CHGBP05060 677 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
SNX6-203ENST00000555416 ATP5JP18859 108 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 PPP4CP60510 307 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
SNX6-203ENST00000555416 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 CDK5RAP2Q96SN8 1893 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 ZNF341Q9BYN7 854 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
SNX6-203ENST00000555416 LAMB1P07942 1786 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNX6-203ENST00000555416 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
SNX6-203ENST00000555416 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
SNX6-203ENST00000555416 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 PTPN18Q99952 460 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
SNX6-203ENST00000555416 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 CSADQ9Y600 493 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 CASP8AP2Q9UKL3 1982 aa16.65■□□□□ 0.26
SNX6-203ENST00000555416 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 PDE6AP16499 860 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 MAP3K10Q02779 954 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 MAP3K12Q12852 859 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
SNX6-203ENST00000555416 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 HAUS7Q99871 368 aa16.64■□□□□ 0.25
SNX6-203ENST00000555416 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.25
SNX6-203ENST00000555416 TCRBV5S4A2TA0A5A2 114 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 MANSC4A6NHS7 340 aaPredicted RBP16.63■□□□□ 0.25
SNX6-203ENST00000555416 BAG3O95817 575 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
SNX6-203ENST00000555416 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
SNX6-203ENST00000555416 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 FLT1P17948 1338 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
SNX6-203ENST00000555416 COL2A1P02458 1487 aaPredicted RBP16.62■□□□□ 0.25
SNX6-203ENST00000555416 FOCADQ5VW36 1801 aa16.62■□□□□ 0.25
SNX6-203ENST00000555416 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
SNX6-203ENST00000555416 TTF1Q15361 905 aaPredicted RBP16.62■□□□□ 0.25
SNX6-203ENST00000555416 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
SNX6-203ENST00000555416 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
SNX6-203ENST00000555416 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
SNX6-203ENST00000555416 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
SNX6-203ENST00000555416 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
SNX6-203ENST00000555416 IRF6O14896 467 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 IGSF3O75054 1194 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 PLCG2P16885 1265 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
SNX6-203ENST00000555416 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 NOL9Q5SY16 702 aaKnown RBP16.61■□□□□ 0.25
SNX6-203ENST00000555416 ECHDC1Q9NTX5 307 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
SNX6-203ENST00000555416 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
SNX6-203ENST00000555416 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
SNX6-203ENST00000555416 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
SNX6-203ENST00000555416 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
SNX6-203ENST00000555416 TBC1D12O60347 775 aa16.59■□□□□ 0.25
SNX6-203ENST00000555416 IGHDP01880 384 aa16.59■□□□□ 0.25
SNX6-203ENST00000555416 ADD2P35612 726 aa16.59■□□□□ 0.25
SNX6-203ENST00000555416 INHBEP58166 350 aa16.59■□□□□ 0.25
SNX6-203ENST00000555416 PPIL2Q13356 520 aa16.59■□□□□ 0.25
SNX6-203ENST00000555416 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
SNX6-203ENST00000555416 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 MAGEB6P1A0A0J9YX57 407 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 GTF2A2P52657 109 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 JAG1P78504 1218 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 EVX2Q03828 476 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 PPATQ06203 517 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 CCL15Q16663 113 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 ANKRD45Q5TZF3 282 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms