RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 TGFBRAP1Q8WUH2 860 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 OSBPL3Q9H4L5 887 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
RIPK3-204ENST00000554756 POLR2AP24928 1970 aaKnown RBP14.57□□□□□ -0.08
RIPK3-204ENST00000554756 RNF113AO15541 343 aaKnown RBP14.57□□□□□ -0.08
RIPK3-204ENST00000554756 ENTPD3O75355 529 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 UBE3CQ15386 1083 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 TMED8Q6PL24 325 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-204ENST00000554756 ZSCAN29Q8IWY8 852 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-204ENST00000554756 SNX21Q969T3 373 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 EVI5LQ96CN4 794 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 TLL2Q9Y6L7 1015 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 RFX7Q2KHR2 1363 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 UBE2Q2LH0YL09 131 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 MAPKAPK5Q8IW41 473 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 LCORLQ8N3X6 602 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 RIOK1Q9BRS2 568 aaKnown RBP14.56□□□□□ -0.08
RIPK3-204ENST00000554756 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 ARMT1Q9H993 441 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
RIPK3-204ENST00000554756 MKRN1Q9UHC7 482 aaKnown RBP14.56□□□□□ -0.08
RIPK3-204ENST00000554756 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 DOCK2Q92608 1830 aa14.56□□□□□ -0.08
RIPK3-204ENST00000554756 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 MBD4O95243 580 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 USP5P45974 858 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 HUNKP57058 714 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 NFKBIBQ15653 356 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 CASC1Q6TDU7 716 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 PAXIP1Q6ZW49 1069 aaPredicted RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 SH3BP5LQ7L8J4 393 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 ANGEL1Q9UNK9 670 aaKnown RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 MIGA2Q7L4E1 593 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 ARMC9Q7Z3E5 817 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 SAPCD2Q86UD0 394 aa14.55□□□□□ -0.08
RIPK3-204ENST00000554756 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 OSBPL5Q9H0X9 879 aaPredicted RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
RIPK3-204ENST00000554756 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
RIPK3-204ENST00000554756 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
RIPK3-204ENST00000554756 GRM1Q13255 1194 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 SLC4A8Q2Y0W8 1093 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 DEFB115Q30KQ5 88 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
RIPK3-204ENST00000554756 CERS3Q8IU89 383 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 HSCBQ8IWL3 235 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 APPBP2Q92624 585 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 CRNKL1Q9BZJ0 848 aaKnown RBP14.54□□□□□ -0.08
RIPK3-204ENST00000554756 FLT1P17948 1338 aa14.54□□□□□ -0.08
RIPK3-204ENST00000554756 M0R2C6 588 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 PRKAB2O43741 272 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 USP2O75604 605 aaPredicted RBP14.53□□□□□ -0.08
RIPK3-204ENST00000554756 SLURP2P0DP57 97 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
RIPK3-204ENST00000554756 FKBP1BP68106 108 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
RIPK3-204ENST00000554756 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
RIPK3-204ENST00000554756 RPAP1Q9BWH6 1393 aaPredicted RBP14.53□□□□□ -0.08
RIPK3-204ENST00000554756 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.08
RIPK3-204ENST00000554756 SDR42E1Q8WUS8 393 aa14.52□□□□□ -0.08
RIPK3-204ENST00000554756 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 ZMYM1Q5SVZ6 1142 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 HOOK2Q96ED9 719 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 PALD1Q9ULE6 856 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 TRPM7Q96QT4 1865 aa14.52□□□□□ -0.09
RIPK3-204ENST00000554756 DEKP35659 375 aaKnown RBP14.51□□□□□ -0.09
RIPK3-204ENST00000554756 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
RIPK3-204ENST00000554756 DCAF15Q66K64 600 aa14.51□□□□□ -0.09
RIPK3-204ENST00000554756 PAPPA2Q9BXP8 1791 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 GPAA1O43292 621 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 SDSP20132 328 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 ZNF157P51786 506 aaPredicted RBP14.5□□□□□ -0.09
RIPK3-204ENST00000554756 RGMBQ6NW40 437 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 DNAJC5GQ8N7S2 189 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 CLMNQ96JQ2 1002 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 FAM227BQ96M60 508 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 STRBPQ96SI9 672 aaKnown RBP14.5□□□□□ -0.09
RIPK3-204ENST00000554756 ZNF341Q9BYN7 854 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 FAM196BA6NMK8 535 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 VEGFBP49765 207 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 NMIQ13287 307 aaPredicted RBP14.5□□□□□ -0.09
RIPK3-204ENST00000554756 MAP3K11Q16584 847 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 LDLRAD1Q5T700 205 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 IL27Q8NEV9 243 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 CAPNS2Q96L46 248 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
RIPK3-204ENST00000554756 ATRNL1Q5VV63 1379 aa14.49□□□□□ -0.09
RIPK3-204ENST00000554756 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
RIPK3-204ENST00000554756 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
RIPK3-204ENST00000554756 HHIPL1Q96JK4 782 aa14.49□□□□□ -0.09
RIPK3-204ENST00000554756 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
RIPK3-204ENST00000554756 DCP1AQ9NPI6 582 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms