RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 CTSWP56202 376 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
PTPN21-205ENST00000554270 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
PTPN21-205ENST00000554270 PLIN2Q99541 437 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 RTN1Q16799 776 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
PTPN21-205ENST00000554270 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPN21-205ENST00000554270 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 TPM1P09493 284 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 NEDD4P46934 1319 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 MB21D2Q8IYB1 491 aaPredicted RBP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 ZSCAN12O43309 604 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 PDE8BO95263 885 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 PCCAP05165 728 aaPredicted RBP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 GYS2P54840 703 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 BAG1Q99933 345 aaPredicted RBP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 LTN1O94822 1766 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 SMIM22K7EJ46 135 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 YEATS4O95619 227 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 ADD2P35612 726 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
PTPN21-205ENST00000554270 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
PTPN21-205ENST00000554270 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 FAM193AP78312 1265 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 BAZ2BQ9UIF8 2168 aaKnown RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 RHOXF2BP0C7M4 288 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 GYG1P46976 350 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 RHOXF2Q9BQY4 288 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 IRX2Q9BZI1 471 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 NFAT5O94916 1531 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 CTIFO43310 598 aaKnown RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
PTPN21-205ENST00000554270 GRIN1Q05586 938 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 ZNF174Q15697 407 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
PTPN21-205ENST00000554270 WTIPA6NIX2 430 aaPredicted RBP13.08□□□□□ -0.32
PTPN21-205ENST00000554270 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 LCORLQ8N3X6 602 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.32
PTPN21-205ENST00000554270 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 GPR108Q9NPR9 543 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 DDX41Q9UJV9 622 aaKnown RBP13.08□□□□□ -0.32
PTPN21-205ENST00000554270 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 CMA1P23946 247 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 SAMSN1Q9NSI8 373 aaKnown RBP13.08□□□□□ -0.32
PTPN21-205ENST00000554270 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 VGLL3A8MV65 326 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 CCP110O43303 1012 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 CIAO1O76071 339 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 ERCC3P19447 782 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 LMAN1P49257 510 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 CLCN6P51797 869 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
PTPN21-205ENST00000554270 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 SLC39A14Q15043 492 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 SARM1Q6SZW1 724 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 BLZF1Q9H2G9 400 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
PTPN21-205ENST00000554270 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
PTPN21-205ENST00000554270 RAD21O60216 631 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 PDE8AO60658 829 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 PUM3Q15397 648 aaKnown RBP13.07□□□□□ -0.32
PTPN21-205ENST00000554270 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
PTPN21-205ENST00000554270 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 SHC4Q6S5L8 630 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 GDAP1L1Q96MZ0 367 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 VPS16Q9H269 839 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
PTPN21-205ENST00000554270 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 XBP1P17861 261 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 CDC25AP30304 524 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 CDC25BP30305 580 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 ZNF569Q5MCW4 686 aa13.06□□□□□ -0.32
PTPN21-205ENST00000554270 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms