RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	BCL9L	Q86UU0	1499 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	FOXP2	O15409	715 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	ACTN4	O43707	911 aa	Known RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	ARID4A	P29374	1257 aa	Predicted RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZAP70	P43403	619 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	EVC	P57679	992 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	HMGN5	P82970	282 aa	Known RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	FKBP4	Q02790	459 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	SCRN1	Q12765	414 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	SCARF1	Q14162	830 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	NAA16	Q6N069	864 aa	Predicted RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZSCAN25	Q6NSZ9	544 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	HCST	Q9UBK5	93 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	CCDC39	Q9UFE4	941 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	KIF3A	Q9Y496	699 aa		6.94	□□□□□ -1.3
RAD51B-219	ENST00000554244	TNRC6C	Q9HCJ0	1690 aa	Known RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244		A0A0G2JLW4	131 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	PTPDC1	A2A3K4	754 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	DTNB	O60941	627 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	KDM4A	O75164	1064 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	CTDNEP1	O95476	244 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	UQCRFS1P1	P0C7P4	283 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	FGFR2	P21802	821 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	MCM5	P33992	734 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	ADD2	P35612	726 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	MCAM	P43121	646 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	EIF5	P55010	431 aa	Known RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	FGD1	P98174	961 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	APOBR	Q0VD83	1088 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	TTF1	Q15361	905 aa	Predicted RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	WASHC4	Q2M389	1173 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	LDHAL6A	Q6ZMR3	332 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	FERMT3	Q86UX7	667 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	MB21D2	Q8IYB1	491 aa	Predicted RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	SYNE4	Q8N205	404 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	RNF214	Q8ND24	703 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZNF274	Q96GC6	653 aa	Predicted RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	SPATA32	Q96LK8	384 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	LRRC2	Q9BYS8	371 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	CNNM1	Q9NRU3	951 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	CCDC87	Q9NVE4	849 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	TRMT112	Q9UI30	125 aa	Known RBP	6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZMYM6	O95789	1325 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	SPATA31A5	Q5VU36	1347 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	MROH5	Q6ZUA9	1318 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	SPATA31A7	Q8IWB4	1347 aa		6.93	□□□□□ -1.3
RAD51B-219	ENST00000554244	DUOX1	Q9NRD9	1551 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244		H3BQV1	296 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	GPAA1	O43292	621 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	PDE8B	O95263	885 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	MSN	P26038	577 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	FUT2	Q10981	343 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	UBE3C	Q15386	1083 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	PUM3	Q15397	648 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	DDB1	Q16531	1140 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	IMMT	Q16891	758 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	KMT5B	Q4FZB7	885 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	PARP10	Q53GL7	1025 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	IFFO2	Q5TF58	517 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	TTLL5	Q6EMB2	1281 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	FAM173B	Q6P4H8	233 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	INTS5	Q6P9B9	1019 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	RBM43	Q6ZSC3	357 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	NYAP1	Q6ZVC0	841 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	LEO1	Q8WVC0	666 aa	Predicted RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	NUP62CL	Q9H1M0	184 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	PIH1D3	Q9NQM4	214 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	DDX19A	Q9NUU7	478 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	NOL7	Q9UMY1	257 aa	Known RBP	6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZKSCAN5	Q9Y2L8	839 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	CARMIL3	Q8ND23	1372 aa		6.92	□□□□□ -1.3
RAD51B-219	ENST00000554244	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PRC1	O43663	620 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZNF500	O60304	480 aa	Predicted RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	CAMTA2	O94983	1202 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	CCDC192	P0DO97	292 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	SLC5A1	P13866	664 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	HCLS1	P14317	486 aa	Predicted RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PDE6A	P16499	860 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	LIG1	P18858	919 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PDIA3	P30101	505 aa	Known RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PHKA1	P46020	1223 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	CRKL	P46109	303 aa	Known RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	MAP3K11	Q16584	847 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PUS10	Q3MIT2	529 aa	Known RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	CCDC102B	Q68D86	513 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	ATL3	Q6DD88	541 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	GIMAP6	Q6P9H5	292 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PI16	Q6UXB8	463 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	RGS22	Q8NE09	1264 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	NCOA7	Q8NI08	942 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	LPIN2	Q92539	896 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	SYTL4	Q96C24	671 aa	Predicted RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	DDX11	Q96FC9	970 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	PUS7L	Q9H0K6	701 aa	Known RBP	6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	CLSTN2	Q9H4D0	955 aa		6.91	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms