RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 FCHSD1Q86WN1 690 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 FAM169BQ8N8A8 192 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 GRIN3AQ8TCU5 1115 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 RNPC3Q96LT9 517 aaKnown RBP6.65□□□□□ -1.34
PABPN1-204ENST00000554062 EPN3Q9H201 632 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 PHAXQ9H814 394 aaKnown RBP6.65□□□□□ -1.34
PABPN1-204ENST00000554062 SH2B1Q9NRF2 756 aaPredicted RBP6.65□□□□□ -1.34
PABPN1-204ENST00000554062 GGA1Q9UJY5 639 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 ADAM30Q9UKF2 790 aa6.65□□□□□ -1.34
PABPN1-204ENST00000554062 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
PABPN1-204ENST00000554062 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 HTR3BO95264 441 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 SLFN14P0C7P3 912 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 NAT2P11245 290 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 SNRPBP14678 240 aaKnown RBP6.64□□□□□ -1.35
PABPN1-204ENST00000554062 PTPROQ16827 1216 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
PABPN1-204ENST00000554062 INTS3Q68E01 1043 aaKnown RBP6.64□□□□□ -1.35
PABPN1-204ENST00000554062 STK35Q8TDR2 534 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 SH3TC2Q8TF17 1288 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 THAP3Q8WTV1 239 aaPredicted RBP6.64□□□□□ -1.35
PABPN1-204ENST00000554062 SLC7A3Q8WY07 619 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 ELMO3Q96BJ8 720 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 LRRC4BQ9NT99 713 aa6.64□□□□□ -1.35
PABPN1-204ENST00000554062 IQCA1LA6NCM1 817 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 FSCN2O14926 492 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 ANAPC15P60006 121 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 IGBP1P78318 339 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 SUZ12Q15022 739 aaKnown RBP6.63□□□□□ -1.35
PABPN1-204ENST00000554062 EEPD1Q7L9B9 569 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 CELF2-AS1Q8N7Q2 184 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 ZSCAN1Q8NBB4 408 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
PABPN1-204ENST00000554062 KLF15Q9UIH9 416 aa6.63□□□□□ -1.35
PABPN1-204ENST00000554062 POLR3KQ9Y2Y1 108 aaPredicted RBP6.63□□□□□ -1.35
PABPN1-204ENST00000554062 IGF1RP08069 1367 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 DNAJC6O75061 913 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 DDAH1O94760 285 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 EPXP11678 715 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 MAOBP27338 520 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 CCNFP41002 786 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 SRSF11Q05519 484 aaKnown RBP6.62□□□□□ -1.35
PABPN1-204ENST00000554062 GAS6Q14393 721 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 KIF4BQ2VIQ3 1234 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 BBS9Q3SYG4 887 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 C2orf27AQ580R0 203 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 ZNF662Q6ZS27 426 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 TTC6Q86TZ1 520 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 DTWD1Q8N5C7 304 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 NUDT8Q8WV74 236 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 FEZ1Q99689 392 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 SPC25Q9HBM1 224 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 TMEM260Q9NX78 707 aa6.62□□□□□ -1.35
PABPN1-204ENST00000554062 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
PABPN1-204ENST00000554062 FAM221BA6H8Z2 402 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 GFRA2O00451 464 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 GRIN3BO60391 1043 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 VSIG8P0DPA2 414 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 PLCG1P19174 1290 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
PABPN1-204ENST00000554062 LONRF2Q1L5Z9 754 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 C20orf204Q6ZNR8 217 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 C16orf86Q6ZW13 317 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 FAM178BQ8IXR5 827 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 DHRS1Q96LJ7 313 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
PABPN1-204ENST00000554062 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 A0A1W2PQH9 124 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 AGRPO00253 132 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 AFF1P51825 1210 aaKnown RBP6.6□□□□□ -1.35
PABPN1-204ENST00000554062 ZNF143P52747 638 aaPredicted RBP6.6□□□□□ -1.35
PABPN1-204ENST00000554062 TCEA2Q15560 299 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 GRIK5Q16478 980 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 NLRC3Q7RTR2 1065 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
PABPN1-204ENST00000554062 KCT2Q8NC54 265 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 ZSWIM2Q8NEG5 633 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
PABPN1-204ENST00000554062 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 PLAAQ9Y263 795 aa6.6□□□□□ -1.35
PABPN1-204ENST00000554062 H3BM21 787 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 LINC01387J3KSC0 135 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 TNFRSF10CO14798 259 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 FANCGO15287 622 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 GJB6O95452 261 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 NME1P15531 152 aaKnown RBP6.59□□□□□ -1.35
PABPN1-204ENST00000554062 ERVK-24P63145 666 aa6.59□□□□□ -1.35
PABPN1-204ENST00000554062 PTPN11Q06124 597 aaPredicted RBP6.59□□□□□ -1.35
PABPN1-204ENST00000554062 SSRP1Q08945 709 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms