RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SIL1Q9H173 461 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 KCNH4Q9UQ05 1017 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 MKI67P46013 3256 aaKnown RBP19.56■□□□□ 0.72
ACTN1-209ENST00000553659 SALL1Q9NSC2 1324 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 NUCB1Q02818 461 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 NFIAQ12857 509 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 USP40Q9NVE5 1235 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 DENND2AQ9ULE3 1009 aa19.55■□□□□ 0.72
ACTN1-209ENST00000553659 SEMA3EO15041 775 aa19.54■□□□□ 0.72
ACTN1-209ENST00000553659 NOL9Q5SY16 702 aaKnown RBP19.54■□□□□ 0.72
ACTN1-209ENST00000553659 SH3TC2Q8TF17 1288 aa19.54■□□□□ 0.72
ACTN1-209ENST00000553659 FAM198AQ9UFP1 575 aa19.54■□□□□ 0.72
ACTN1-209ENST00000553659 HDAC5Q9UQL6 1122 aa19.54■□□□□ 0.72
ACTN1-209ENST00000553659 MGAMO43451 1857 aa19.54■□□□□ 0.72
ACTN1-209ENST00000553659 DOCK2Q92608 1830 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 PDHXO00330 501 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 ZBTB22O15209 634 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 HMMRO75330 724 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 GNAI3P08754 354 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 IL15P40933 162 aaPredicted RBP19.53■□□□□ 0.72
ACTN1-209ENST00000553659 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 CPA4Q9UI42 421 aa19.53■□□□□ 0.72
ACTN1-209ENST00000553659 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.72
ACTN1-209ENST00000553659 PSMC4P43686 418 aa19.52■□□□□ 0.72
ACTN1-209ENST00000553659 PHKA1P46020 1223 aa19.52■□□□□ 0.72
ACTN1-209ENST00000553659 SKAP1Q86WV1 359 aa19.52■□□□□ 0.72
ACTN1-209ENST00000553659 ADGRA2Q96PE1 1338 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 HOXD10P28358 340 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 CTGFP29279 349 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 MOGSQ13724 837 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 ZGPATQ8N5A5 531 aaKnown RBP19.51■□□□□ 0.71
ACTN1-209ENST00000553659 IPO9Q96P70 1041 aaKnown RBP19.51■□□□□ 0.71
ACTN1-209ENST00000553659 SRRDQ9UH36 339 aa19.51■□□□□ 0.71
ACTN1-209ENST00000553659 LRRFIP2Q9Y608 721 aaKnown RBP19.51■□□□□ 0.71
ACTN1-209ENST00000553659 CXCL11O14625 94 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
ACTN1-209ENST00000553659 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
ACTN1-209ENST00000553659 CCDC102BQ68D86 513 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 TRIM47Q96LD4 638 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 COPRSQ9NQ92 184 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 ZBTB47Q9UFB7 747 aaPredicted RBP19.5■□□□□ 0.71
ACTN1-209ENST00000553659 PA2G4Q9UQ80 394 aaKnown RBP19.5■□□□□ 0.71
ACTN1-209ENST00000553659 BRCA2P51587 3418 aa19.5■□□□□ 0.71
ACTN1-209ENST00000553659 PTPRFP10586 1907 aa19.49■□□□□ 0.71
ACTN1-209ENST00000553659 PHF20L1A8MW92 1017 aa19.49■□□□□ 0.71
ACTN1-209ENST00000553659 ENTPD3O75355 529 aa19.49■□□□□ 0.71
ACTN1-209ENST00000553659 OSBPP22059 807 aa19.49■□□□□ 0.71
ACTN1-209ENST00000553659 GAKO14976 1311 aa19.49■□□□□ 0.71
ACTN1-209ENST00000553659 FMNL1O95466 1100 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-209ENST00000553659 GNAI2P04899 355 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 ADORA1P30542 326 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 GPAT2Q6NUI2 795 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 SCYL3Q8IZE3 742 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 RAET1EQ8TD07 263 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 FAM163AQ96GL9 167 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-209ENST00000553659 PARK7Q99497 189 aaKnown RBP19.48■□□□□ 0.71
ACTN1-209ENST00000553659 DCTPP1Q9H773 170 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
ACTN1-209ENST00000553659 ATRNL1Q5VV63 1379 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 TIMM10P62072 90 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 MAP3K10Q02779 954 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 MTFR1Q15390 333 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 FASTKD5Q7L8L6 764 aaKnown RBP19.47■□□□□ 0.71
ACTN1-209ENST00000553659 SLF2Q8IX21 1173 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
ACTN1-209ENST00000553659 ZHX2Q9Y6X8 837 aa19.47■□□□□ 0.71
ACTN1-209ENST00000553659 PDS5AQ29RF7 1337 aaKnown RBP19.47■□□□□ 0.71
ACTN1-209ENST00000553659 DOCK1Q14185 1865 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 BCRP11274 1271 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 PTPRAP18433 802 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 GRK4P32298 578 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 RASGRF1Q13972 1273 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 SPTY2D1Q68D10 685 aaPredicted RBP19.46■□□□□ 0.71
ACTN1-209ENST00000553659 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 SH3BP5LQ7L8J4 393 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 DZIP1Q86YF9 867 aaKnown RBP19.46■□□□□ 0.71
ACTN1-209ENST00000553659 ZSCAN29Q8IWY8 852 aaPredicted RBP19.46■□□□□ 0.71
ACTN1-209ENST00000553659 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 MEIS3Q99687 375 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 PICK1Q9NRD5 415 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 ABCF2Q9UG63 623 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 MYPNQ86TC9 1320 aa19.46■□□□□ 0.71
ACTN1-209ENST00000553659 A0A0G2JLL6 359 aaPredicted RBP19.45■□□□□ 0.7
ACTN1-209ENST00000553659 CYP2C8P10632 490 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 FCGRTP55899 365 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 ANKRD45Q5TZF3 282 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 PRRT2Q7Z6L0 340 aaPredicted RBP19.45■□□□□ 0.7
ACTN1-209ENST00000553659 NKX2-3Q8TAU0 364 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 COLQQ9Y215 455 aaPredicted RBP19.45■□□□□ 0.7
ACTN1-209ENST00000553659 AKAP2Q9Y2D5 859 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
ACTN1-209ENST00000553659 RFX7Q2KHR2 1363 aa19.44■□□□□ 0.7
ACTN1-209ENST00000553659 DDTLA6NHG4 134 aaPredicted RBP19.44■□□□□ 0.7
ACTN1-209ENST00000553659 XAGE2Q96GT9 111 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms