RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 TBC1D12O60347 775 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 CYP7A1P22680 504 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 VGLL4Q14135 290 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 NOL9Q5SY16 702 aaKnown RBP10.06□□□□□ -0.8
PCNX1-204ENST00000553428 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 TEX11Q8IYF3 940 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 HAUS7Q99871 368 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-204ENST00000553428 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 ECHDC1Q9NTX5 307 aa10.06□□□□□ -0.8
PCNX1-204ENST00000553428 AATFQ9NY61 560 aaKnown RBP eCLIP10.06□□□□□ -0.8
PCNX1-204ENST00000553428 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 DDTLA6NHG4 134 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 GTF2A2P52657 109 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 PICALMQ13492 652 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 COL13A1Q5TAT6 717 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 MIGA2Q7L4E1 593 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 MAGEB6Q8N7X4 407 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 OPTNQ96CV9 577 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 DNAJC2Q99543 621 aaKnown RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-204ENST00000553428 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
PCNX1-204ENST00000553428 AKAP11Q9UKA4 1901 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 GOLIM4O00461 696 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 ERC2O15083 957 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 TRPA1O75762 1119 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 PDE6AP16499 860 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 INPP5BP32019 993 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 GJA5P36382 358 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 PPATQ06203 517 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 MKRN3Q13064 507 aaKnown RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 PPIL2Q13356 520 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 SLC9C2Q5TAH2 1124 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 ADGRA1Q86SQ6 560 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 SH3RF3Q8TEJ3 882 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 RWDD1Q9H446 243 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
PCNX1-204ENST00000553428 NDUFB9Q9Y6M9 179 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 TTC41PQ6P2S7 1318 aa10.04□□□□□ -0.8
PCNX1-204ENST00000553428 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 HLA-DOAP06340 250 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 CETPP11597 493 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 SNAPC2Q13487 334 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
PCNX1-204ENST00000553428 FOXP4Q8IVH2 680 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-204ENST00000553428 SCYL3Q8IZE3 742 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 TGFBRAP1Q8WUH2 860 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 ZKSCAN4Q969J2 545 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-204ENST00000553428 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 BCL11AQ9H165 835 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.03□□□□□ -0.8
PCNX1-204ENST00000553428 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
PCNX1-204ENST00000553428 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 CEP350Q5VT06 3117 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 FLT1P17948 1338 aa10.03□□□□□ -0.8
PCNX1-204ENST00000553428 ADD2P35612 726 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 USP5P45974 858 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 METTL16Q86W50 562 aaKnown RBP10.02□□□□□ -0.81
PCNX1-204ENST00000553428 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
PCNX1-204ENST00000553428 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 CRNKL1Q9BZJ0 848 aaKnown RBP10.02□□□□□ -0.81
PCNX1-204ENST00000553428 PICK1Q9NRD5 415 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 GINM1Q9NU53 330 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
PCNX1-204ENST00000553428 CCL15-CCL14A0A0B4J2E2 113 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 TCRBV5S4A2TA0A5A2 114 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 CXCL11O14625 94 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 IRF6O14896 467 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 GLRX3O76003 335 aaKnown RBP10.01□□□□□ -0.81
PCNX1-204ENST00000553428 PTPRAP18433 802 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 MX1P20591 662 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 DYNLL1P63167 89 aaKnown RBP10.01□□□□□ -0.81
PCNX1-204ENST00000553428 CCL15Q16663 113 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 ANKRD45Q5TZF3 282 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 TTC6Q86TZ1 520 aa10.01□□□□□ -0.81
PCNX1-204ENST00000553428 MAPKAPK5Q8IW41 473 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms