RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FGFR2P21802 821 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 PPATQ06203 517 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
ACTN1-208ENST00000553370 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
ACTN1-208ENST00000553370 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-208ENST00000553370 FAM151AQ8WW52 585 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 ARMC5Q96C12 935 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 ZCCHC17Q9NP64 241 aaKnown RBP12.3□□□□□ -0.44
ACTN1-208ENST00000553370 USP40Q9NVE5 1235 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 DENND2AQ9ULE3 1009 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 DAGLAQ9Y4D2 1042 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
ACTN1-208ENST00000553370 BRCA2P51587 3418 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 DOCK3Q8IZD9 2030 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 SEMA3EO15041 775 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 TLR2O60603 784 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 CIAO1O76071 339 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 PRDX5P30044 214 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 INPP5BP32019 993 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-208ENST00000553370 CDC42EP5Q6NZY7 148 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
ACTN1-208ENST00000553370 FMNL1O95466 1100 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 GNRH1P01148 92 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 LACTBP83111 547 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 POTEHQ6S545 545 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 ZNF333Q96JL9 665 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
ACTN1-208ENST00000553370 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
ACTN1-208ENST00000553370 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.44
ACTN1-208ENST00000553370 PDHXO00330 501 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-208ENST00000553370 HOXD10P28358 340 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 PHKA1P46020 1223 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 SPTY2D1Q68D10 685 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-208ENST00000553370 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.45
ACTN1-208ENST00000553370 MAST2Q6P0Q8 1798 aa12.27□□□□□ -0.45
ACTN1-208ENST00000553370 CDK5RAP2Q96SN8 1893 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 GNAI3P08754 354 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 PSMC4P43686 418 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 RGS3P49796 1198 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 PRMT2P55345 433 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 NFIAQ12857 509 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 PICALMQ13492 652 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
ACTN1-208ENST00000553370 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
ACTN1-208ENST00000553370 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 ADORA1P30542 326 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
ACTN1-208ENST00000553370 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 ERICH6Q7L0X2 663 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 NEUROD6Q96NK8 337 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 NOL10Q9BSC4 688 aaKnown RBP12.25□□□□□ -0.45
ACTN1-208ENST00000553370 MYPNQ86TC9 1320 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 SALL1Q9NSC2 1324 aa12.25□□□□□ -0.45
ACTN1-208ENST00000553370 MYH1P12882 1939 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 BTDP43251 543 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 FCGRTP55899 365 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 CAP1Q01518 475 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
ACTN1-208ENST00000553370 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-208ENST00000553370 MEIS3Q99687 375 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
ACTN1-208ENST00000553370 FOCADQ5VW36 1801 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 A0A1B0GUL7 405 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
ACTN1-208ENST00000553370 ENTPD3O75355 529 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 UBXN2AP68543 259 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 GSTO1P78417 241 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 OS9Q13438 667 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-208ENST00000553370 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
ACTN1-208ENST00000553370 SCYL3Q8IZE3 742 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-208ENST00000553370 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 SRRDQ9UH36 339 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
ACTN1-208ENST00000553370 MROH7-TTC4A0A0A0MT08 1334 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms