RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 HOOK2Q96ED9 719 aa18.88■□□□□ 0.61
SNX29P1-201ENST00000548357 ABCF2Q9UG63 623 aa18.88■□□□□ 0.61
SNX29P1-201ENST00000548357 PDHXO00330 501 aa18.87■□□□□ 0.61
SNX29P1-201ENST00000548357 ZBTB22O15209 634 aa18.87■□□□□ 0.61
SNX29P1-201ENST00000548357 BTDP43251 543 aa18.87■□□□□ 0.61
SNX29P1-201ENST00000548357 IDI2Q9BXS1 227 aa18.87■□□□□ 0.61
SNX29P1-201ENST00000548357 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
SNX29P1-201ENST00000548357 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 PDS5AQ29RF7 1337 aaKnown RBP18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 GNAI3P08754 354 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 RHBDL3P58872 404 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 MECOMQ03112 1051 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 PICALMQ13492 652 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 ANKRD23Q86SG2 305 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
SNX29P1-201ENST00000548357 MYH1P12882 1939 aa18.85■□□□□ 0.61
SNX29P1-201ENST00000548357 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
SNX29P1-201ENST00000548357 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
SNX29P1-201ENST00000548357 ATF7IPQ6VMQ6 1270 aa18.85■□□□□ 0.61
SNX29P1-201ENST00000548357 TRIM47Q96LD4 638 aa18.85■□□□□ 0.61
SNX29P1-201ENST00000548357 ENTPD3O75355 529 aa18.84■□□□□ 0.61
SNX29P1-201ENST00000548357 CYP2C8P10632 490 aa18.84■□□□□ 0.61
SNX29P1-201ENST00000548357 TMEM57Q8N5G2 664 aa18.84■□□□□ 0.61
SNX29P1-201ENST00000548357 NEUROD6Q96NK8 337 aa18.84■□□□□ 0.61
SNX29P1-201ENST00000548357 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
SNX29P1-201ENST00000548357 ALPK3Q96L96 1907 aa18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 PTPRAP18433 802 aa18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 MCAMP43121 646 aa18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 ZGPATQ8N5A5 531 aaKnown RBP18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 FAM163AQ96GL9 167 aaPredicted RBP18.83■□□□□ 0.6
SNX29P1-201ENST00000548357 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 OSBPP22059 807 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 ARID4AP29374 1257 aaPredicted RBP18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 RRP1BQ14684 758 aaKnown RBP18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 MVPQ14764 893 aaKnown RBP18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 MTFR1Q15390 333 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 NSUN4Q96CB9 384 aaKnown RBP18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 C1orf115Q9H7X2 142 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 AKAP2Q9Y2D5 859 aa18.82■□□□□ 0.6
SNX29P1-201ENST00000548357 A0A0G2JLL6 359 aaPredicted RBP18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 GNAI2P04899 355 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 BCRP11274 1271 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 PSMC4P43686 418 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 PRRT2Q7Z6L0 340 aaPredicted RBP18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 SPATA5Q8NB90 893 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 SHISA4Q96DD7 197 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 AFG3L2Q9Y4W6 797 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 ZHX2Q9Y6X8 837 aa18.81■□□□□ 0.6
SNX29P1-201ENST00000548357 CXCL11O14625 94 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 RLBP1P12271 317 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 POLA2Q14181 598 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 KIF22Q14807 665 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 SLC4A8Q2Y0W8 1093 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 GADL1Q6ZQY3 521 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 TMEM106CQ9BVX2 250 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 SRRDQ9UH36 339 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 GABRQQ9UN88 632 aa18.79■□□□□ 0.6
SNX29P1-201ENST00000548357 ARHGEF6Q15052 776 aa18.78■□□□□ 0.6
SNX29P1-201ENST00000548357 SPTY2D1Q68D10 685 aaPredicted RBP18.78■□□□□ 0.6
SNX29P1-201ENST00000548357 ADGRA1Q86SQ6 560 aa18.78■□□□□ 0.6
SNX29P1-201ENST00000548357 DBNDD2Q9BQY9 259 aa18.78■□□□□ 0.6
SNX29P1-201ENST00000548357 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 MYPNQ86TC9 1320 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 TRIOBPQ9H2D6 2365 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 TRIM75PA6NK02 468 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 PRKCZQ05513 592 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 NBPF11Q86T75 865 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 SH3RF3Q8TEJ3 882 aaPredicted RBP18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 PARK7Q99497 189 aaKnown RBP18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 PICK1Q9NRD5 415 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 TLR7Q9NYK1 1049 aaKnown RBP18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 RAI14Q9P0K7 980 aa18.77■□□□□ 0.6
SNX29P1-201ENST00000548357 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 SLF2Q8IX21 1173 aa18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 OSBPL5Q9H0X9 879 aaPredicted RBP18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 DDX60LQ5H9U9 1706 aaKnown RBP18.76■□□□□ 0.59
SNX29P1-201ENST00000548357 CTNND1O60716 968 aaKnown RBP18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 GNRH1P01148 92 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 JAG1P78504 1218 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 TNNI3KQ59H18 835 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 MIER1Q8N108 512 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 FPGT-TNNI3KV9GXZ4 949 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
SNX29P1-201ENST00000548357 RANBP2P49792 3224 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms