RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 BAG3O95817 575 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 PLCG2P16885 1265 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 TM4SF4P48230 202 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 MAP3K12Q12852 859 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 ADGRA1Q86SQ6 560 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 ZFPM1Q8IX07 1006 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 WNK4Q96J92 1243 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 ZNF341Q9BYN7 854 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.09
YBX3-217ENST00000546164 IDH1O75874 414 aaKnown RBP14.45□□□□□ -0.1
YBX3-217ENST00000546164 MAP3K10Q02779 954 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 SREBF2Q12772 1141 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
YBX3-217ENST00000546164 VGLL4Q14135 290 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 SH3BP5LQ7L8J4 393 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 CERS3Q8IU89 383 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 NOL10Q9BSC4 688 aaKnown RBP14.45□□□□□ -0.1
YBX3-217ENST00000546164 ZNF112Q9UJU3 913 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 NDUFB9Q9Y6M9 179 aa14.45□□□□□ -0.1
YBX3-217ENST00000546164 MANSC4A6NHS7 340 aaPredicted RBP14.44□□□□□ -0.1
YBX3-217ENST00000546164 SMARCA5O60264 1052 aaPredicted RBP14.44□□□□□ -0.1
YBX3-217ENST00000546164 CYP7A1P22680 504 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 LBX1P52954 281 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 INHBEP58166 350 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 COL13A1Q5TAT6 717 aaPredicted RBP14.44□□□□□ -0.1
YBX3-217ENST00000546164 TEX11Q8IYF3 940 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 WRNIP1Q96S55 665 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 HAUS7Q99871 368 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 RNF186Q9NXI6 227 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
YBX3-217ENST00000546164 CSADQ9Y600 493 aa14.44□□□□□ -0.1
YBX3-217ENST00000546164 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 DDTLA6NHG4 134 aaPredicted RBP14.43□□□□□ -0.1
YBX3-217ENST00000546164 SPDYE5A6NIY4 337 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 GJA5P36382 358 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
YBX3-217ENST00000546164 PICALMQ13492 652 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 MIGA2Q7L4E1 593 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 MAGEB6Q8N7X4 407 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 SH3RF3Q8TEJ3 882 aaPredicted RBP14.43□□□□□ -0.1
YBX3-217ENST00000546164 DNAJC2Q99543 621 aaKnown RBP14.43□□□□□ -0.1
YBX3-217ENST00000546164 OSBPL5Q9H0X9 879 aaPredicted RBP14.43□□□□□ -0.1
YBX3-217ENST00000546164 ELP3Q9H9T3 547 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 SNCAIPQ9Y6H5 919 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 DOCK2Q92608 1830 aa14.43□□□□□ -0.1
YBX3-217ENST00000546164 TESPA1A2RU30 521 aaPredicted RBP14.42□□□□□ -0.1
YBX3-217ENST00000546164 GOLIM4O00461 696 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 TBC1D12O60347 775 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
YBX3-217ENST00000546164 ERO1BQ86YB8 467 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 ZSCAN29Q8IWY8 852 aaPredicted RBP14.42□□□□□ -0.1
YBX3-217ENST00000546164 OPTNQ96CV9 577 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 CFHR5Q9BXR6 569 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 BOLA2Q9H3K6 86 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 PAG1Q9NWQ8 432 aa14.42□□□□□ -0.1
YBX3-217ENST00000546164 SUPT16HQ9Y5B9 1047 aaKnown RBP14.42□□□□□ -0.1
YBX3-217ENST00000546164 PHF20L1A8MW92 1017 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 PDE6AP16499 860 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 INPP5BP32019 993 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 ZKSCAN4Q969J2 545 aaPredicted RBP14.41□□□□□ -0.1
YBX3-217ENST00000546164 GCC1Q96CN9 775 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 BCL11AQ9H165 835 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 DHX36Q9H2U1 1008 aaKnown RBP14.41□□□□□ -0.1
YBX3-217ENST00000546164 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 LAMB1P07942 1786 aa14.41□□□□□ -0.1
YBX3-217ENST00000546164 MYO5AQ9Y4I1 1855 aaKnown RBP14.41□□□□□ -0.1
YBX3-217ENST00000546164 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 TRPA1O75762 1119 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 ALDH1A1P00352 501 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 DYNLL1P63167 89 aaKnown RBP14.4□□□□□ -0.1
YBX3-217ENST00000546164 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 EDC3Q96F86 508 aaKnown RBP14.4□□□□□ -0.1
YBX3-217ENST00000546164 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
YBX3-217ENST00000546164 FLT1P17948 1338 aa14.4□□□□□ -0.1
YBX3-217ENST00000546164 PPATQ06203 517 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 PPIL2Q13356 520 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 NOM1Q5C9Z4 860 aaKnown RBP14.39□□□□□ -0.11
YBX3-217ENST00000546164 IFNL1Q8IU54 200 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 MIGA1Q8NAN2 632 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 EXOC6Q8TAG9 804 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 TGFBRAP1Q8WUH2 860 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 TTC41PQ6P2S7 1318 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 ZNF532Q9HCE3 1301 aa14.39□□□□□ -0.11
YBX3-217ENST00000546164 IGF2BP3O00425 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
YBX3-217ENST00000546164 ADD2P35612 726 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 GTF2A2P52657 109 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 METTL16Q86W50 562 aaKnown RBP14.38□□□□□ -0.11
YBX3-217ENST00000546164 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 SMC5Q8IY18 1101 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.38□□□□□ -0.11
YBX3-217ENST00000546164 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
YBX3-217ENST00000546164 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
YBX3-217ENST00000546164 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 SALL3Q9BXA9 1300 aa14.38□□□□□ -0.11
YBX3-217ENST00000546164 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms