RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-206ENST00000544964 PDS5AQ29RF7 1337 aaKnown RBP15.34■□□□□ 0.05
ACTN1-206ENST00000544964 TLR2O60603 784 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
ACTN1-206ENST00000544964 PPATQ06203 517 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 MOGSQ13724 837 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
ACTN1-206ENST00000544964 ZFPM1Q8IX07 1006 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 ZNF333Q96JL9 665 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 ARHGAP39Q9C0H5 1083 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 PTCH2Q9Y6C5 1203 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
ACTN1-206ENST00000544964 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
ACTN1-206ENST00000544964 HMMRO75330 724 aa15.32■□□□□ 0.04
ACTN1-206ENST00000544964 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-206ENST00000544964 AAMPQ13685 434 aa15.32■□□□□ 0.04
ACTN1-206ENST00000544964 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
ACTN1-206ENST00000544964 MGAMO43451 1857 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 TIMM10P62072 90 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 TFCP2Q12800 502 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.041e-7■□□□□ 10.8
ACTN1-206ENST00000544964 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-206ENST00000544964 SH3BP5LQ7L8J4 393 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 IDI2Q9BXS1 227 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
ACTN1-206ENST00000544964 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 CTGFP29279 349 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 RGS3P49796 1198 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
ACTN1-206ENST00000544964 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 CDK5RAP2Q96SN8 1893 aa15.3■□□□□ 0.04
ACTN1-206ENST00000544964 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
ACTN1-206ENST00000544964 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 MROH7-TTC4A0A0A0MT08 1334 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 APBB1O00213 710 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 ENTPD3O75355 529 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 WDHD1O75717 1129 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-206ENST00000544964 C17orf99Q6UX52 265 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
ACTN1-206ENST00000544964 DZIP1Q86YF9 867 aaKnown RBP15.29■□□□□ 0.04
ACTN1-206ENST00000544964 DDX4Q9NQI0 724 aaKnown RBP15.29■□□□□ 0.04
ACTN1-206ENST00000544964 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
ACTN1-206ENST00000544964 PDHXO00330 501 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 SLURP2P0DP57 97 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-206ENST00000544964 RHBDL3P58872 404 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 PI16Q6UXB8 463 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-206ENST00000544964 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 LOC285556D6RIA3 1793 aa15.28■□□□□ 0.04
ACTN1-206ENST00000544964 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-206ENST00000544964 BTDP43251 543 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 MAP3K10Q02779 954 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 MECOMQ03112 1051 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 ARHGEF6Q15052 776 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 GPAT2Q6NUI2 795 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 CPA4Q9UI42 421 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 AKAP2Q9Y2D5 859 aa15.27■□□□□ 0.04
ACTN1-206ENST00000544964 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.03
ACTN1-206ENST00000544964 IGHDP01880 384 aa15.26■□□□□ 0.03
ACTN1-206ENST00000544964 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-206ENST00000544964 HDAC1Q13547 482 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-206ENST00000544964 SH3TC2Q8TF17 1288 aa15.26■□□□□ 0.03
ACTN1-206ENST00000544964 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
ACTN1-206ENST00000544964 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
ACTN1-206ENST00000544964 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-206ENST00000544964 DCTPP1Q9H773 170 aa15.26■□□□□ 0.03
ACTN1-206ENST00000544964 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-206ENST00000544964 GNRH1P01148 92 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 PTPRAP18433 802 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 KIF22Q14807 665 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
ACTN1-206ENST00000544964 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-206ENST00000544964 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-206ENST00000544964 RANBP2P49792 3224 aaKnown RBP15.25■□□□□ 0.03
ACTN1-206ENST00000544964 DOCK3Q8IZD9 2030 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 CXCL11O14625 94 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-206ENST00000544964 CYP2C8P10632 490 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 BCRP11274 1271 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 MCAMP43121 646 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 PICALMQ13492 652 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 SPTY2D1Q68D10 685 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-206ENST00000544964 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 ERC1Q8IUD2 1116 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 SPATA5Q8NB90 893 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
ACTN1-206ENST00000544964 PARK7Q99497 189 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms