RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 GOLGB1Q14789 3259 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ERICH2A1L162 156 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ATP1A3P13637 1013 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 SSRP1Q08945 709 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 TRIM29Q14134 588 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 UVSSAQ2YD98 709 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 TNKSO95271 1327 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 GOLGA8HP0CJ92 632 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 FAM160A1Q05DH4 1040 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 NAA30Q147X3 362 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 CAVIN4Q5BKX8 364 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 DIS3L2Q8IYB7 885 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 FMR1NBQ8N0W7 255 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 WTAPQ15007 396 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 TRMT44Q8IYL2 757 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 RFX7Q2KHR2 1363 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 F8W031 263 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 SMC2O95347 1197 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ANO1Q5XXA6 986 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 CACTINQ8WUQ7 758 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 DPF2Q92785 391 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF219Q9P2Y4 722 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 USP21Q9UK80 565 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L8P0C7I0 530 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 LMOD1P29536 600 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 CDC25AP30304 524 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 PDE4BQ07343 736 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZRSR1Q15695 479 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 UIMC1Q96RL1 719 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZPR1O75312 459 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF202O95125 648 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 PARP10Q53GL7 1025 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 CREBRFQ8IUR6 639 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 SLC44A5Q8NCS7 719 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 SETDB2Q96T68 719 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 LLPHQ9BRT6 129 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 TJP1Q07157 1748 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 RIMBP2O15034 1052 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF75DP51815 510 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 V9GYY5 206 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 HSP90AA2PQ14568 343 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 GPKOWQ92917 476 aaPredicted RBP eCLIP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 EPSTI1Q96J88 318 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 RIOK1Q9BRS2 568 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 V9GY48 417 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 LRP6O75581 1613 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 EIF6P56537 245 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 CTR9Q6PD62 1173 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 UBAC1Q9BSL1 405 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 LRRC4BQ9NT99 713 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 RASGRP4Q8TDF6 673 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 CDC5LQ99459 802 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 MXD3Q9BW11 206 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 IQCB1Q15051 598 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ADALQ6DHV7 355 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF654Q8IZM8 581 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 ABCC6O95255 1503 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 DHX16O60231 1041 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 MMP1P03956 469 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 HIBADHP31937 336 aaKnown RBP4.36□□□□□ -1.71
BRCA2-206ENST00000544455 AFMP43652 599 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 NACAP1Q9BZK3 213 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 RTEL1Q9NZ71 1219 aa4.36□□□□□ -1.71
BRCA2-206ENST00000544455 FMNL1O95466 1100 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF174Q15697 407 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 HS1BP3Q53T59 392 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 AXDND1Q5T1B0 1012 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 FAM196AQ6ZSG2 479 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 PLIN2Q99541 437 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RFC4P35249 363 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TOB1P50616 345 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TPD52L1Q16890 204 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 SMYD4Q8IYR2 804 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 MAP3K14Q99558 947 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 BSDC1Q9NW68 430 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 IFNKQ9P0W0 207 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 SCN11AQ9UI33 1791 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TMEM232C9JQI7 657 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RAD21O60216 631 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 SERTAD1Q9UHV2 236 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 PARP4Q9UKK3 1724 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 STX17P56962 302 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 IFIT1BQ5T764 474 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TMC6Q7Z403 805 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 PLA2G4DQ86XP0 818 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 MAPKAPK5Q8IW41 473 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ENAHQ8N8S7 591 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 NLRP3Q96P20 1036 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 PICALMQ13492 652 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 FBXO3Q9UK99 471 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF652Q9Y2D9 606 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 STRCQ7RTU9 1775 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ROBO1Q9Y6N7 1651 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 A0A087X0B3 334 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms