RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MKRN1Q9UHC7 482 aaKnown RBP23.31■■□□□ 1.32
COPS7A-218ENST00000543939 SUGT1Q9Y2Z0 365 aa23.31■■□□□ 1.32
COPS7A-218ENST00000543939 GPR75-ASB3A0A0A6YYF3 556 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 GOLGA8BA8MQT2 603 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 PCP11498 1178 aaKnown RBP23.3■■□□□ 1.32
COPS7A-218ENST00000543939 DOK7Q18PE1 504 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 RRP12Q5JTH9 1297 aaKnown RBP23.3■■□□□ 1.32
COPS7A-218ENST00000543939 SGMS1Q86VZ5 419 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 CERS3Q8IU89 383 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 SH3RF3Q8TEJ3 882 aaPredicted RBP23.3■■□□□ 1.32
COPS7A-218ENST00000543939 NAV1Q8NEY1 1877 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 LIFRP42702 1097 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 HMGN5P82970 282 aaKnown RBP23.3■■□□□ 1.32
COPS7A-218ENST00000543939 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 CC2D2BQ6DHV5 1058 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 SLF2Q8IX21 1173 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 STK11IPQ8N1F8 1099 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 TOMM22Q9NS69 142 aa23.3■■□□□ 1.32
COPS7A-218ENST00000543939 ARPP21Q9UBL0 812 aaPredicted RBP23.3■■□□□ 1.32
COPS7A-218ENST00000543939 GAKO14976 1311 aa23.29■■□□□ 1.32
COPS7A-218ENST00000543939 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
COPS7A-218ENST00000543939 SENP2Q9HC62 589 aa23.29■■□□□ 1.32
COPS7A-218ENST00000543939 LMBRD1Q9NUN5 540 aa23.29■■□□□ 1.32
COPS7A-218ENST00000543939 VPS37CA5D8V6 355 aaPredicted RBP23.28■■□□□ 1.32
COPS7A-218ENST00000543939 IFIT3O14879 490 aaKnown RBP23.28■■□□□ 1.32
COPS7A-218ENST00000543939 BTDP43251 543 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 SKOR2Q2VWA4 1001 aaPredicted RBP23.28■■□□□ 1.32
COPS7A-218ENST00000543939 ZNF219Q9P2Y4 722 aaPredicted RBP23.28■■□□□ 1.32
COPS7A-218ENST00000543939 G3V3G9 751 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 APOA5Q6Q788 366 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 PODNQ7Z5L7 613 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 CERS5Q8N5B7 392 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 ESR2Q92731 530 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 DDX11Q96FC9 970 aa23.28■■□□□ 1.32
COPS7A-218ENST00000543939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.28■■□□□ 1.32
COPS7A-218ENST00000543939 ZNF646O15015 1829 aaPredicted RBP23.27■■□□□ 1.32
COPS7A-218ENST00000543939 DHX16O60231 1041 aaKnown RBP23.27■■□□□ 1.32
COPS7A-218ENST00000543939 USP5P45974 858 aa23.27■■□□□ 1.32
COPS7A-218ENST00000543939 FOCADQ5VW36 1801 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 CYP2D6P10635 497 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
COPS7A-218ENST00000543939 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 FAM184AQ8NB25 1140 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 ATP6V1DQ9Y5K8 247 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 SCN9AQ15858 1988 aa23.26■■□□□ 1.31
COPS7A-218ENST00000543939 ORC4O43929 436 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 PLCG2P16885 1265 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 EVX2Q03828 476 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 FBXW7Q969H0 707 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 DBNDD1Q9H9R9 158 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 DDX60LQ5H9U9 1706 aaKnown RBP23.25■■□□□ 1.31
COPS7A-218ENST00000543939 SLC3A2P08195 630 aaKnown RBP23.25■■□□□ 1.31
COPS7A-218ENST00000543939 USP17L8P0C7I0 530 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 NFXL1Q6ZNB6 911 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 RAB11FIP4Q86YS3 637 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 TGFBRAP1Q8WUH2 860 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 ZKSCAN3Q9BRR0 538 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 KIF3AQ9Y496 699 aa23.25■■□□□ 1.31
COPS7A-218ENST00000543939 PRPF40AO75400 957 aaKnown RBP23.24■■□□□ 1.31
COPS7A-218ENST00000543939 KCNA3P22001 575 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 RHBDL3P58872 404 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 C12orf60Q5U649 245 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 TMTC2Q8N394 836 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 TTLL6Q8N841 843 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
COPS7A-218ENST00000543939 ERICH2A1L162 156 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 CCDC69A6NI79 296 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 ZBTB43O43298 467 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 FDPSP14324 419 aaKnown RBP23.23■■□□□ 1.31
COPS7A-218ENST00000543939 METAP2P50579 478 aaKnown RBP eCLIP23.23■■□□□ 1.31
COPS7A-218ENST00000543939 GSE1Q14687 1217 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 WTAPQ15007 396 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 SEC23AQ15436 765 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
COPS7A-218ENST00000543939 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
COPS7A-218ENST00000543939 UBAC1Q9BSL1 405 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 NID2Q14112 1375 aa23.23■■□□□ 1.31
COPS7A-218ENST00000543939 MYH1P12882 1939 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 C21orf2O43822 256 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 DPEP1P16444 411 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 GRIPAP1Q4V328 841 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 TEX11Q8IYF3 940 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 SUPT20HQ8NEM7 779 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 MXD3Q9BW11 206 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 SLC12A7Q9Y666 1083 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 ROBO3Q96MS0 1386 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 ECE2O60344 883 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 PRDM1O75626 825 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
COPS7A-218ENST00000543939 KIAA2012Q0VF49 1180 aa23.22■■□□□ 1.31
COPS7A-218ENST00000543939 TTF2Q9UNY4 1162 aaKnown RBP23.22■■□□□ 1.31
COPS7A-218ENST00000543939 CPLX1O14810 134 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 RANBP6O60518 1105 aaKnown RBP23.21■■□□□ 1.31
COPS7A-218ENST00000543939 PDE4BQ07343 736 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 KLHL40Q2TBA0 621 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 STRIP1Q5VSL9 837 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 MICU3Q86XE3 530 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 MAPKAPK5Q8IW41 473 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms