RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
LMO3-226ENST00000541589 H0YGN5 161 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 TK2O00142 265 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 PCCAP05165 728 aaPredicted RBP9.89□□□□□ -0.83
LMO3-226ENST00000541589 RPS8P62241 208 aaKnown RBP9.89□□□□□ -0.83
LMO3-226ENST00000541589 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
LMO3-226ENST00000541589 SLC17A8Q8NDX2 589 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 GPATCH3Q96I76 525 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 ZNF333Q96JL9 665 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 ADAM33Q9BZ11 813 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
LMO3-226ENST00000541589 COL6A3P12111 3177 aa9.89□□□□□ -0.83
LMO3-226ENST00000541589 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
LMO3-226ENST00000541589 WNT10BO00744 389 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 ERC2O15083 957 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 GLRX3O76003 335 aaKnown RBP9.88□□□□□ -0.83
LMO3-226ENST00000541589 SASH1O94885 1247 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 IFIT2P09913 472 aaKnown RBP9.88□□□□□ -0.83
LMO3-226ENST00000541589 NF2P35240 595 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 LMBR1LQ6UX01 489 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 ARMC9Q7Z3E5 817 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 CD99L2Q8TCZ2 262 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 ECHDC1Q9NTX5 307 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 PSME4Q14997 1843 aa9.88□□□□□ -0.83
LMO3-226ENST00000541589 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 UFL1O94874 794 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 REC8O95072 547 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 MAP3K11Q16584 847 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 PODNQ7Z5L7 613 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 AACSQ86V21 672 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 ZBTB38Q8NAP3 1195 aaPredicted RBP9.87□□□□□ -0.83
LMO3-226ENST00000541589 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 FAM89AQ96GI7 184 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 PLA2G12BQ9BX93 195 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 SIL1Q9H173 461 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
LMO3-226ENST00000541589 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
LMO3-226ENST00000541589 HRO43593 1189 aa9.86□□□□□ -0.83
LMO3-226ENST00000541589 ZBTB48P10074 688 aaPredicted RBP9.86□□□□□ -0.83
LMO3-226ENST00000541589 KLHDC4Q8TBB5 520 aa9.86□□□□□ -0.83
LMO3-226ENST00000541589 EAF2Q96CJ1 260 aaPredicted RBP9.86□□□□□ -0.83
LMO3-226ENST00000541589 PRO3102Q9H379 93 aa9.86□□□□□ -0.83
LMO3-226ENST00000541589 LAMB1P07942 1786 aa9.86□□□□□ -0.83
LMO3-226ENST00000541589 CEP290O15078 2479 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 PTPREP23469 700 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 CHMLP26374 656 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 CRHR2Q13324 411 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 PRKG1Q13976 671 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
LMO3-226ENST00000541589 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 USP26Q9BXU7 913 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 ANGEL1Q9UNK9 670 aaKnown RBP9.85□□□□□ -0.83
LMO3-226ENST00000541589 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 CIAO1O76071 339 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 SP3Q02447 781 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 DACT2Q5SW24 774 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 TYW1BQ6NUM6 668 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 ZBED3Q96IU2 234 aaPredicted RBP9.85□□□□□ -0.83
LMO3-226ENST00000541589 WNK4Q96J92 1243 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 GPR108Q9NPR9 543 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 SEC31BQ9NQW1 1179 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 ANKIB1Q9P2G1 1089 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 FZD1Q9UP38 647 aa9.85□□□□□ -0.83
LMO3-226ENST00000541589 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 UNCXA6NJT0 531 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 SPDYE16A6NNV3 312 aaPredicted RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 EYA2O00167 538 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 IRS4O14654 1257 aaPredicted RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 EPB41L2O43491 1005 aaKnown RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 CSF1RP07333 972 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 IL15P40933 162 aaPredicted RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 SLC4A3P48751 1232 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 MMP14P50281 582 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 PLCB2Q00722 1185 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 TFCP2Q12800 502 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 CCDC57Q2TAC2 916 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 TNNI3KQ59H18 835 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 APOBEC3FQ8IUX4 373 aaKnown RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 SNX21Q969T3 373 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 CLMNQ96JQ2 1002 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 PTPN18Q99952 460 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 MXD3Q9BW11 206 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 VPS9D1Q9Y2B5 631 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.84□□□□□ -0.83
LMO3-226ENST00000541589 FPGT-TNNI3KV9GXZ4 949 aa9.84□□□□□ -0.83
LMO3-226ENST00000541589 SSC5DA1L4H1 1573 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 ZNF646O15015 1829 aaPredicted RBP9.83□□□□□ -0.84
LMO3-226ENST00000541589 ATP2B4P23634 1241 aa9.83□□□□□ -0.84
LMO3-226ENST00000541589 GJA5P36382 358 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms